Job Description P76460 Confidence 1.57% Date Thu Jan 5 12:23:05 GMT 2012 Rank 51 Aligned Residues 51 % Identity 14% Template c3hzqA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state Resolution 3.82 Å

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		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.														.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																						.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	M	A	I	A	Y	G	E	Q	W	M	N	M	A	Q	P	F	W	A	.	.	.	L	P	A	L	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	V	R	D	I	M	G	Y	C	I	T	A	L	L	F	S	G	V	I	F	V	I
Query Conservation																						.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	A	V	V	M	G	A	A	F	N	K	I	I	C	S	L	V	E	N	I	I	M	P	L	I	G	K	I	F	G	S	V	D	F	A	K	E	W	S	F	W	G	I	K	Y	G	L	F	I	Q	S	V	I	D	F	I	I	I	A	F	A	L	F	I	F
Template Known Secondary structure																							T								S	S	S		S				T	T				S	S				T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions