 |
Job Description | P76460 | Confidence | 1.03% | Date | Thu Jan 5 12:23:05 GMT 2012 |
Rank | 92 | Aligned Residues | 57 |
% Identity | 11% | Template | c3gd8A_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:aquaporin-4; |
PDBTitle: crystal structure of human aquaporin 4 at 1.8 and its mechanism of2 conductance
|
Resolution | 1.80 Å |
|
 |
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | V | M | A | I | A | Y | G | E | Q | W | M | N | M | A | Q | P | F | W | A | L | P | A | L | A | I | A | G | L | G | V | R | D | I | M | G | Y | C | I | T | A | L | L | F | S | G | V | I | F | V | I | G | L | T | L | F |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
I | A | T | M | V | Q | C | F | G | H | I | S | G | G | H | I | N | P | A | V | T | V | A | M | V | C | T | R | K | I | S | I | A | K | S | V | F | Y | I | A | A | Q | C | L | G | A | I | I | G | A | G | I | L | Y | L | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|