Return to main results Retrieve Phyre Job Id

Job DescriptionP75851
Confidence2.28%DateWed Jan 25 15:21:03 GMT 2012
Rank47Aligned Residues88
% Identity8%Templatec3qnqD_
PDB info PDB header:membrane protein, transport proteinChain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
Resolution3.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210......... 220.........230.........240.........250.
Predicted Secondary structure 







.


Query SS confidence 














































.































Query Sequence  ILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFL. QTDVVVVAIILYALLGKLADVSAQLLERLWLR
Query Conservation 


   
 
       
            
    


  
       .      
      

          
 

  
Alig confidence 














































.































Template Conservation   

 
   
   
                       
        
       
  

  

   

  
 
   
    
Template Sequence  LIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIA
Template Known Secondary structure  TTSS



S



TTS
TTTT
TTT
Template Predicted Secondary structure 











Template SS confidence 















































































   349350.........360.........370.........380.........390.........400.........410.........420........
 
   252.......260
Predicted Secondary structure 

Query SS confidence 








Query Sequence  WNPAYHLKE
Query Conservation 
        
Alig confidence 








Template Conservation   
       
Template Sequence  EEKGEAAAE
Template Known Secondary structure  TT




Template Predicted Secondary structure 
Template SS confidence 








   429430.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions