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Job DescriptionP75851
Confidence2.20%DateWed Jan 25 15:21:03 GMT 2012
Rank48Aligned Residues162
% Identity15%Templatec1oy8A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
Resolution3.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  FSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDR
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Template Sequence  SLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFA. . . . .
Template Known Secondary structure  TTSS

SSSGGGTGGGSS

B
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   875....880.........890.........900.........910.........920.........930.........940.........
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  GLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYA
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Template Sequence  . . KDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILG. . . . . . VMPLVISTGAGS. . . . . GAQNAVGTGVMGGMVTATV
Template Known Secondary structure  ..SSS


TTTTTT......STT

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   950.........960.........970.........980..... ....990....... ..1000.........1010......
 
   233......240.........250..
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Query Sequence  LLGKLADVSAQLLERLWLRW
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Template Sequence  LAIFFVPVFFVVVRRRFSRK
Template Known Secondary structure  TSSSSSSTTT
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   1017..1020.........1030......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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