 |
Job Description | P04949 | Confidence | 9.10% | Date | Thu Jan 5 10:58:25 GMT 2012 |
Rank | 47 | Aligned Residues | 55 |
% Identity | 16% | Template | c3e20C_ |
PDB info |
PDB header:translation | Chain: C: PDB Molecule:eukaryotic peptide chain release factor subunit 1; |
PDBTitle: crystal structure of s.pombe erf1/erf3 complex
|
Resolution | 3.50 Å |
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | N | N | N | L | Q | R | V | R | E | L | T | V | Q | A | T | T | G | T | N | S | E | S | D | L | S | S | I | Q | D | E | I | K | S | R | L | D | E | I | D | R | V | S | G | Q | T | Q | F | N | G | V | N | V | L | A | K |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
| . |
|
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
| . |   |   |   |   |   |
|   |
|
|
|
|   |
|   |
|
Template Sequence |   |
Q | I | S | R | Y | S | N | M | L | A | E | E | Y | G | T | A | S | N | . |
I | K | S | R | V | N | R | L | S | V | L | S | A | I | T | S | T | R | E | R | L | K | . |
L | Y | N | K | V | P | D | N | G | L | V | I | Y | C | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S | S |
| T | T | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|