Job Description P04949 Confidence 6.04% Date Thu Jan 5 10:58:25 GMT 2012 Rank 54 Aligned Residues 83 % Identity 10% Template c3d5cX_ PDB info PDB header:ribosome Chain: X: PDB Molecule:peptide chain release factor 1; PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400. Resolution 3.21 Å

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		23	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.									.	.
Query SS confidence														.									.	.
Query Sequence		S	A	L	S	S	S	I	E	R	L	S	S	.	G	L	R	I	N	S	A	K	.	.	D	D	A	A	G	Q	A	I	A	N	R	F	T	S	N	I	K	G	L	T	Q	A	A	R	N	A	N	D	G	I	S	V	A	Q	T	T	E	G	A	L	S	E	I	N	N	N	L	Q	R	V	R	E	L	T	V	Q	A
Query Conservation														.									.	.
Alig confidence														.									.	.				.	.	.																							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																												.	.	.																							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		D	K	L	D	R	L	E	E	E	Y	R	E	L	E	A	L	L	S	D	P	E	V	L	K	D	K	.	.	.	G	R	Y	Q	S	L	S	R	R	Y	A	E	M	G	E	V	I	G	L	I	R	E	.	.	.	.	.	.	.	.	.	.	.	Y	R	K	V	L	E	D	L	E	Q	A	E	S	L	L	D	.	.
Template Known Secondary structure								T										T	T	S	T	T	T	T	S			.	.	.																							.	.	.	.	.	.	.	.	.	.	.													T	S	T	T	.	.
Template Predicted Secondary structure																												.	.	.																							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	G	T	N	S	E	S	D	L	S	S	I	Q	D	E	I	K	S	R	L	D	E	I	D	R	V
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	D	P	E	L	K	E	M	A	K	A	E	R	E	A	L	L	A	R	K	E	A	L
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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