Job Description P04949 Confidence 5.34% Date Thu Jan 5 10:58:25 GMT 2012 Rank 61 Aligned Residues 50 % Identity 8% Template c2v8sV_ PDB info PDB header:protein transport Chain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex Resolution 2.22 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	A	Q	T	T	E	G	A	L	S	E	I	N	N	N	L	Q	R	V	R	E	L	T	V	Q	A	T	T	G	T	N	S	E	S	D	L	S	S	I	Q	D	E	I	K	S	R	L	D	E	I	D	R	V
Query Conservation
Alig confidence																							.								.	.	.	.
Template Conservation																							.								.	.	.	.
Template Sequence		K	K	L	V	R	D	F	D	E	K	Q	Q	E	A	N	E	T	L	A	E	M	.	E	E	E	L	R	Y	A	.	.	.	.	P	L	T	F	R	N	P	M	M	S	K	L	R	N	Y	R	K	D	L	A	K	L
Template Known Secondary structure																							.					T	T	S	.	.	.	.
Template Predicted Secondary structure																							.								.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions