Job Description P75936 Confidence 35.38% Date Thu Jan 5 12:16:10 GMT 2012 Rank 39 Aligned Residues 97 % Identity 12% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																.																																					.	.
Query SS confidence																.																																					.	.
Query Sequence		L	Q	Q	A	A	D	K	V	T	A	T	I	T	D	.	K	N	G	A	V	V	R	T	I	D	I	G	E	L	T	A	G	V	H	S	F	T	W	D	G	T	L	T	D	G	S	T	A	P	N	G	.	.	S	Y	N	V	A	I	S	A	S	N	G	G	T	Q	L	V	A	Q	P	L	Q	F	A	L	V	Q	G
Query Conservation																.																																					.	.
Alig confidence																.											.	.													.	.	.										.	.
Template Conservation																											.	.													.	.	.
Template Sequence		V	L	T	T	L	Y	S	G	R	V	E	I	W	N	Y	E	T	Q	V	E	V	R	S	I	Q	.	.	V	T	E	T	P	V	R	A	G	K	F	I	.	.	.	A	R	K	N	W	I	I	V	G	S	D	D	F	R	I	R	V	F	N	Y	N	T	G	E	K	V	V	D	F	E	A	H	P	D	Y	I	R	S
Template Known Secondary structure							T	T	S							T	T	T	T								.	.			S	S									.	.	.	G	G	G	T							T	T	S							T	T	T											S	S
Template Predicted Secondary structure																											.	.													.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	I	R	G	N	S	G	N	T	L	D	L	G	T	Y	.	G	T	T	T	L	D	E	V	R	Q
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		I	A	V	H	P	T	K	P	Y	V	L	S	G	S	D	D	L	T	V	K	L	W	N	W	E	N
Template Known Secondary structure						S	S	S	S							T	T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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