Job Description P31552 Confidence 100.00% Date Thu Jan 5 11:48:13 GMT 2012 Rank 25 Aligned Residues 413 % Identity 21% Template c3o82B_ PDB info PDB header:ligase Chain: B: PDB Molecule:peptide arylation enzyme; PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	G	G	Q	H	L	R	Q	M	W	D	D	L	A	D	V	Y	G	H	K	T	A	L	I	C	E	S	S	G	G	V	V	N	R	Y	S	Y	L	E	L	N	Q	E	I	N	R	T	A	N	L	F	Y	T	L	G	I	R	K	G	D	K	V	A	L	H	L	D	N	C	P	E	F	I	F	C	W	F	G
Query Conservation
Alig confidence																															.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		G	Y	W	I	D	Q	P	L	T	R	I	L	T	V	G	V	Q	S	H	P	H	S	L	A	I	I	C	G	E	.	.	.	.	.	R	Q	L	S	Y	I	E	L	D	R	L	S	T	N	L	A	T	R	L	A	E	K	G	L	G	K	G	D	T	A	L	V	Q	L	P	N	V	A	E	F	Y	I	V	F	F	A
Template Known Secondary structure		T	S						T	T											T	T	S						T	T	.	.	.	.	.																						T	T			T	T									S	S	T
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	I	G	A	I	M	V	P	I	N	A	R	L	L	C	E	E	S	A	W	I	L	Q	N	S	Q	A	C	L	L	V	T	S	A	Q	F	Y	P	M	Y	Q	Q	I	Q	Q	E	D	A	T	Q	L	R	H	I	C	L	T	D	V	A	L	P	A	D	D	G	V	S	S	F	T	Q	L	K	N	Q	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	A	G	V	V	V	L	N	A	L	Y	S	H	R	Q	Y	E	L	N	A	F	I	K	Q	I	Q	P	K	L	L	I	G	S	R	Q	H	E	V	F	S	N	N	Q	F	I	D	S	L	H	D	V	N	L	S	P	E	I	I	L	M	L	N	H	Q	A	T	D	F	G	L	L	D	W	I	E	T	P	A
Template Known Secondary structure						T								T	T																S						T	T	S	T	T	T	S	S	S										T				S						T			T	T	S		B							S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	T	L	C	Y	A	P	P	L	S	T	D	D	T	A	E	I	L	F	T	S	G	T	T	S	R	P	K	G	V	V	I	T	H	Y	N	L	R	F	A	G	Y	Y	S	A	W	Q	C	A	L	R	D	D	D	V	Y	L	T	V	M	P	A	F	H	I	D	C	.	Q	C	T	A	A	M	A	A	F	S	A	G
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		E	T	F	V	D	F	S	S	T	P	A	D	E	V	A	F	F	Q	L	S	G	G	S	T	G	T	P	K	L	I	P	R	T	H	N	D	Y	D	Y	S	V	R	A	S	A	E	I	C	G	L	N	S	N	T	R	L	L	C	A	L	P	A	P	H	N	F	M	L	S	S	P	G	A	L	G	V	L	H	A	G
Template Known Secondary structure		S	S									T	T	S								S	S		S	S	S																						T	T			T	T							S		T	T	S						S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		A	T	F	V	L	V	E	K	Y	S	A	R	A	F	W	G	Q	V	Q	K	Y	R	A	T	V	T	E	C	I	P	M	M	I	R	T	L	M	V	Q	P	P	S	A	N	D	Q	Q	H	R	.	L	R	E	V	M	F	Y	L	N	L	S	E	Q	E	K	D	A	F	C	E	R	F	G	V	R	L	L	T	S	Y
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		G	C	V	V	M	A	P	N	P	E	P	L	N	C	F	S	I	I	Q	R	H	Q	V	N	M	A	S	L	V	P	S	A	V	I	M	W	L	E	K	A	A	Q	Y	K	D	Q	I	Q	S	L	K	L	L	Q	V	G	G	A	S	F	P	E	S	L	A	R	Q	V	P	E	V	L	N	C	K	L	Q	Q	V	F
Template Known Secondary structure								S	S														T																						G	G	G	G	T	T								S	S								T								S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		G	M	T	E	T	I	V	G	I	I	G	D	R	P	G	D	K	R	R	W	P	S	I	G	R	V	G	F	C	.	Y	E	A	E	I	R	D	D	H	N	R	P	L	P	A	G	E	I	G	E	I	C	I	K	G	I	P	G	K	T	I	F	K	E	Y	F	L	N	P	Q	A	T	A	K	V	L	E	A	D	G
Query Conservation																															.
Alig confidence																															.																											.	.	.
Template Conservation																																																										.	.	.
Template Sequence		G	M	A	E	G	L	V	N	Y	T	R	L	D	D	S	D	E	Q	I	F	T	T	Q	G	R	P	I	S	S	D	D	E	I	K	I	V	D	E	Q	Y	R	E	V	P	E	G	E	I	G	M	L	A	T	R	G	P	.	.	.	Y	T	F	C	G	Y	Y	Q	S	P	E	H	N	S	Q	V	F	D	E	D	N
Template Known Secondary structure				T	T	S							T	T	S													S		T	T								T	T	S		B			T	T	S									T	.	.	.	T	S		S			T	T									B		T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	H	T	G	D	T	G	Y	R	D	E	E	D	F	F	Y	F	V	D	R	R	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	Y	S	G	D	L	V	Q	R	T	P	D	G	N	L	R	V	V	G	R	I	K	D
Template Known Secondary structure													T	T	S
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions