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Job DescriptionP31552
Confidence100.00%DateThu Jan 5 11:48:13 GMT 2012
Rank12Aligned Residues484
% Identity18%Templatec3iteB_
PDB info PDB header:ligaseChain: B: PDB Molecule:sidn siderophore synthetase; PDBTitle: the third adenylation domain of the fungal sidn non-2 ribosomal peptide synthetase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  HLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGA
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Template Sequence  PPSHYIETWAKTHPEWKAVEVATGFIVTEDWTYKKLNETANQVANLIIHASL. HGRAIAVSLDRSLIAFAIIVGIXKSGN
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   16...20.........30.........40.........50.........60....... ..70.........80.........90....
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  IMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYA
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Template Sequence  TYVPIEAGLPNDRKSFLLRDSRAAXAFVCDNNFDGVELPPETKVLD. . . . . . . . . . . . . . . TKNQSFIENLSTQDTSDIL
Template Known Secondary structure 

TTS
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S
TTTTTT



TT
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   100.........110.........120.........130.........140..... ....150.........160....
 
   168.170.........180.........190.........200..... ....210.........220.........230.........
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Query Sequence  PPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYS. . . . . . . . AWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSA
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Template Sequence  NNYPENLDAYLLYTSG. . GTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEXFLAWRFG
Template Known Secondary structure 



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GGGGG
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   165....170.........180 .........190.........200.........210.........220.........230.........240..
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  GATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSY
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Template Sequence  LCAVTGERLSXLDDLPRTFRELGVTHAGIVPSLLDQTGLVPED. . . APHLVYLGVGGEKXTPRTQQIWSSSDRVALVNVY
Template Known Secondary structure 


TTT


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GGG...STT

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   245....250.........260.........270.........280....... ..290.........300.........310.........320.
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  GMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGW
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Template Sequence  GPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHVK. . KGXAGELVIEGSLVANGYLNRPDAKGFCDINGRK
Template Known Secondary structure 

GGG
S
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TTS
TT
TT

TTSS
B

..TTSSTTS
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TT


TT
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   322.......330.........340.........350.........360..... ....370.........380.........390.........
 
   400.........410.........420.........430.........440.........450.........460.........470. .....
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Query Sequence  . LHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE. . GETLS
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Template Sequence  XYRTGDIVRXDADSSILFLGRKDEQV. . . KQRLELGEVSEVIRSLSPTDIDVVTLLLFLVSFVASSGAAVRGELRNYKEI
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   400.........410.........420..... ....430.........440.........450.........460.........470......
 
   477..480.........490.........500.... .....510.......
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Query Sequence  EEEFFRFCEQNMAKFKVPSYLEIRKDLP. RNCSGKIIRKNLK
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Template Sequence  NNSLRQACEQTLPAYXVPDFIIPISFIPLRDTSAKTDAKALE
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GGGS
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B
TTSSSB
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   492.......500.........510.........520.........530...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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