Job Description P31552 Confidence 100.00% Date Thu Jan 5 11:48:13 GMT 2012 Rank 16 Aligned Residues 485 % Identity 19% Template c3gqwB_ PDB info PDB header:ligase Chain: B: PDB Molecule:fatty acid amp ligase; PDBTitle: crystal structure of a fatty acid amp ligase from e. coli with an acyl2 adenylate product bound Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	R	Q	M	W	D	D	L	A	D	V	Y	G	H	K	T	A	L	I	C	E	S	S	G	G	V	V	N	R	Y	S	Y	L	E	L	N	Q	E	I	N	R	T	A	N	L	F	Y	T	L	G	I	R	K	G	D	K	V	A	L	H	L	D	N	C	P	E	F	I	F	C	W	F	G	L	A	K	I	G	A
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		T	L	V	D	A	L	D	Y	A	A	L	S	S	A	G	X	N	F	Y	.	.	D	R	R	C	Q	L	E	D	Q	L	E	Y	Q	T	L	K	A	R	A	E	A	G	A	K	R	L	L	S	L	N	L	K	K	G	D	R	V	A	L	I	A	E	T	S	S	E	F	V	E	A	F	F	A	C	Q	Y	A	G	L
Template Known Secondary structure		S									T	T	S	S							.	.		T	T																									T	T	T			T	T									S	S													T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	P	I	N	A	R	L	L	C	E	E	S	A	W	I	L	Q	N	S	Q	A	C	L	L	V	T	S	A	Q	F	Y	P	M	Y	Q	Q	I	Q	Q	E	D	A	T	Q	L	R	H	I	C	L	T	D	V	A	L	P	A	D	D	G	V	S	S	F	T	Q	L	K	N	Q	Q	P	A	T	L	C	Y	A
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	V	P	L	A	I	P	S	W	S	A	K	L	Q	G	L	L	A	S	C	Q	P	A	A	I	I	T	G	D	E	W	L	P	L	V	N	A	A	T	H	D	N	P	E	L	H	V	L	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	F	K	A	L	P	E	A	D	V	A	L
Template Known Secondary structure																									S						S	T	T									T	T		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S				S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																	.	.	.	.	.	.	.	.	.	160	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		P	P	L	S	T	D	D	T	A	E	I	L	F	T	S	G	T	T	S	R	P	K	G	V	V	I	T	H	Y	N	L	R	F	A	G	Y	Y	S	A	W	.	Q	C	A	L	R	D	D	D	V	Y	L	T	V	M	P	A	F	H	I	D	C	Q	C	T	A	A	M	A	A	F	S	A	G	A	T	F	V	L	V
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		Q	R	P	V	P	N	D	I	A	Y	L	Q	Y	T	S	G	S	T	R	F	P	R	G	V	I	I	T	H	R	E	V	X	A	N	L	R	A	I	S	H	D	G	I	K	L	R	P	G	D	R	C	V	S	W	L	P	F	Y	H	D	X	G	L	V	G	F	L	L	T	P	V	A	T	Q	L	S	V	D	Y	L
Template Known Secondary structure						T	T	S						G	G	G			S	S	S																					T	T	S				T	T									T	T	S								T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		247	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.							.
Predicted Secondary structure					.	.	.	.																														.	.	.	.																																		.	.	.	.	.	.
Query SS confidence					.	.	.	.																														.	.	.	.																																		.	.	.	.	.	.
Query Sequence		E	K	Y	.	.	.	.	S	A	R	A	F	W	G	Q	V	Q	K	Y	R	A	T	V	T	E	C	I	P	M	M	I	R	T	L	M	V	.	.	.	.	Q	P	P	S	A	N	D	Q	Q	H	R	L	R	E	V	M	F	Y	L	N	L	S	E	Q	E	K	D	A	F	C	E	R	F	.	.	.	.	.	.	G
Query Conservation					.	.	.	.																														.	.	.	.																																		.	.	.	.	.	.
Alig confidence					.	.	.	.																														.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	Q	D	F	A	X	R	P	L	Q	W	L	K	L	I	S	K	N	R	G	T	V	S	V	A	P	P	F	G	Y	E	L	C	Q	R	R	V	N	E	K	D	L	A	E	L	D	L	S	C	W	R	V	A	G	I	G	A	E	P	I	S	A	E	Q	L	H	Q	F	A	E	C	F	R	Q	V	N	F	D	N
Template Known Secondary structure									S	T										T	T																	S							T	T				T	T								S	S																T	T	T			G
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																												.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	L	L	T	S	Y	G	M	T	E	T	I	V	G	I	I	G	D	R	P	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	R	W	P	S	I	G	R	V	G	F	C	Y	E	A	E	I	R	D	D	H	N	R	P	L	P	A	G	E
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	F	X	P	C	Y	G	L	A	E	N	A	L	A	V	S	F	S	D	E	A	S	G	V	V	V	N	E	V	D	R	D	I	L	E	Y	Q	G	K	A	V	A	P	G	A	E	T	R	A	V	S	T	F	V	N	C	G	K	A	L	P	E	H	G	I	E	I	R	N	E	A	G	X	P	V	A	E	R	V
Template Known Secondary structure		G	G								G	G	G	S	S		S					T	T																	S	B						S	S									B						T	T								T	T	S		B			T	T	B
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	I	C	I	K	G	I	P	G	K	T	I	F	K	E	Y	F	L	N	P	Q	A	T	A	K	V	L	E	A	D	G	W	L	H	T	G	D	T	G	Y	R	D	E	E	D	F	F	Y	F	V	D	R	R	C	N	M	I	K	R	G	G	E	N	V	S	C	V	E	L	E	N	I	I	A	A	H	P	K
Query Conservation
Alig confidence											.	.	.																.	.
Template Conservation											.	.	.																.	.
Template Sequence		V	G	H	I	C	I	S	G	P	.	.	.	S	L	X	S	G	Y	F	G	D	Q	V	S	Q	D	E	.	.	I	A	A	T	G	W	L	D	T	G	D	L	G	Y	L	L	D	G	Y	L	Y	V	T	G	R	I	K	D	L	I	I	I	R	G	R	N	I	W	P	Q	D	I	E	Y	I	A	E	Q	E	P	E
Template Known Secondary structure									S	T	.	.	.	T					B	T	T								.	.					S												T	T								G	G	G					S	S														T	S	S	S
Template Predicted Secondary structure											.	.	.																.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500			.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																													.													.	.
Query SS confidence																																													.													.	.
Query Sequence		I	Q	D	I	V	V	V	G	I	K	D	S	I	R	D	E	A	I	K	A	F	V	V	L	N	E	G	E	T	L	S	E	E	E	F	F	R	F	C	E	Q	N	M	.	A	K	F	K	V	P	S	Y	L	E	I	R	.	.	K	D	L	P	R	N	C	S	G	K	I	I	R	K	N	L	K
Query Conservation																																													.													.	.
Alig confidence														.	.																														.													.	.
Template Conservation														.	.
Template Sequence		I	H	S	G	D	A	I	A	F	V	T	A	.	.	Q	E	K	I	I	L	Q	I	Q	C	R	I	S	D	E	E	R	R	G	Q	L	I	H	A	L	A	A	R	I	Q	S	E	F	G	V	T	A	A	I	D	L	L	P	P	H	S	I	P	R	T	S	S	G	K	P	A	R	A	E	A	K
Template Known Secondary structure				T	T	S							T	.	.	T	S																																S										T	T	S	S				T	T	S
Template Predicted Secondary structure														.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.