Job Description P31552 Confidence 100.00% Date Thu Jan 5 11:48:13 GMT 2012 Rank 24 Aligned Residues 467 % Identity 21% Template c3g7sA_ PDB info PDB header:ligase Chain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1); PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus Resolution 2.15 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		G	G	Q	H	L	R	Q	M	W	D	D	L	A	D	V	Y	G	H	K	T	A	L	I	C	E	S	.	.	.	S	G	G	V	V	N	R	Y	S	Y	L	E	L	N	Q	E	I	N	R	T	A	N	L	F	Y	T	L	G	I	R	K	G	D	K	V	A	L	H	L	D	N	C	P	E	F	I	F	C	W	F	G
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		P	K	I	S	L	A	D	R	I	D	A	A	A	E	K	F	G	E	K	T	A	I	I	S	A	E	P	K	F	P	S	E	F	P	E	S	X	N	F	L	E	I	C	E	V	T	K	K	L	A	S	G	I	S	R	K	G	V	R	K	G	E	H	V	G	V	C	I	P	N	S	I	D	Y	V	X	T	I	Y	A
Template Known Secondary structure						T	T											T	T	S							S	S					S	S		S																					T	T			T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	I	G	A	I	M	V	P	I	N	A	R	L	L	C	E	E	S	A	W	I	L	Q	N	S	Q	A	C	L	L	V	T	S	A	Q	F	Y	P	M	Y	Q	Q	I	Q	Q	E	D	A	T	Q	L	R	H	I	C	L	T	D	V	A	L	P	A	D	D	G	V	S	S	F	T	Q	L	K	N	Q	Q	P
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		L	W	R	V	A	A	T	P	V	P	I	N	P	X	Y	K	S	F	E	L	E	H	I	L	N	D	S	E	A	T	T	L	V	V	H	S	X	L	Y	E	N	F	K	P	V	L	E	K	T	G	V	E	R	V	F	V	V	G	G	E	V	N	S	.	.	.	.	.	.	.	.	L	S	E	V	X	D	S	G	S
Template Known Secondary structure					T	T								T	T													T	T		S						G	G	G									T	T	S									T		S	S	S		.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	C	Y	A	P	P	L	S	T	D	D	T	A	E	I	L	F	T	S	G	T	T	S	R	P	K	G	V	V	I	T	H	Y	N	L	R	F	A	G	Y	Y	S	A	W	Q	C	A	L	R	D	D	D	V	Y	L	T	V	M	P	A	F	H	I	D	C	Q	C	T	A	A	M	A	A	F	S	A	G	A
Query Conservation
Alig confidence																																				.																																	.
Template Conservation																																				.																																	.
Template Sequence		E	D	F	E	N	V	K	V	N	P	E	E	D	V	A	L	I	P	Y	T	G	G	T	T	G	P	K	G	V	X	L	T	H	F	.	N	L	A	A	N	A	L	Q	L	A	V	A	T	G	L	S	H	X	D	T	I	V	G	C	X	P	X	F	H	S	A	E	.	F	G	L	V	N	L	X	V	T	V	G	N
Template Known Secondary structure		S									T	T	T	S																						.																	T	T							S		T	T	S				.					T	T
Template Predicted Secondary structure																																				.																																	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																								.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.																																	.	.	.	.	.	.	.
Query Sequence		T	F	V	L	V	E	K	Y	S	A	R	A	F	W	G	Q	V	Q	K	Y	R	A	T	V	T	E	C	I	P	M	M	I	R	T	L	M	V	Q	.	.	.	P	P	S	A	N	D	Q	Q	H	R	L	R	E	V	M	F	Y	L	N	L	S	E	Q	E	K	D	A	F	C	E	R	F	.	.	.	.	.	.	.
Query Conservation																																								.	.	.																																	.	.	.	.	.	.	.
Alig confidence																																								.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	V	V	X	G	X	F	N	Q	E	X	L	A	E	N	I	E	K	Y	K	G	T	F	S	W	A	V	P	P	A	L	N	V	L	V	N	T	L	E	S	S	N	K	T	Y	D	W	S	Y	L	K	V	F	A	T	G	A	W	P	V	A	P	A	L	V	E	K	L	L	K	L	A	A	E	K	C	N	N	P
Template Known Secondary structure							S	S													T	T																					S							T	T								S	S																		S	S		T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	R	L	L	T	S	Y	G	M	T	E	T	I	V	G	I	I	G	D	R	P	G	D	K	R	R	W	P	S	I	G	R	V	G	F	C	Y	E	A	E	I	R	D	D	H	N	R	P	L	P	A	G	E	I	G	E	I	C	I	K	G	I	P	G	K	T	I	F	K	E	Y	F	L	N	P	Q	A	T	A
Query Conservation
Alig confidence																																																.	.
Template Conservation																																																.	.
Template Sequence		R	L	R	H	N	Q	I	W	G	X	T	E	A	C	P	X	V	T	T	N	P	P	L	R	L	D	K	S	T	T	Q	G	V	P	X	S	D	I	E	L	K	V	I	S	L	E	.	.	D	G	R	E	L	G	V	G	E	S	G	E	I	V	I	R	G	P	N	I	F	K	G	Y	W	K	R	E	K	E	N	Q
Template Known Secondary structure		T										G	G	G	S	S							G	G	G	G	G	G	T	T	S						T	T								S	S	.	.	S						T	T									S	T	T	S		S			T	T		T	T	G	G	G
Template Predicted Secondary structure																																																.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		392	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		K	V	L	.	.	.	.	E	A	D	G	W	L	H	T	G	D	T	G	Y	R	D	E	E	D	F	F	Y	F	V	D	R	R	C	N	M	I	K	R	G	G	E	N	V	S	C	V	E	L	E	N	I	I	A	A	H	P	K	I	Q	D	I	V	V	V	G	I	K	D	S	I	R	D	E	A	I	K	A	F	V
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		E	C	W	W	Y	D	E	K	G	R	K	F	F	R	T	G	D	V	G	F	I	D	E	E	G	F	L	H	F	Q	D	R	.	.	.	.	.	.	.	.	.	.	.	.	V	P	F	E	L	E	A	L	L	X	K	H	E	A	V	X	D	V	A	V	I	G	K	P	D	.	.	.	.	P	K	A	F	I	V	L
Template Known Secondary structure		T	S					T	T															T	T	S								.	.	.	.	.	.	.	.	.	.	.	.										T	T	S	T	T												.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.													.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460					.	.	.	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	E	G	E	T	L	S	E	E	E	F	F	R	F	C	E	Q	N	M	A	K	F	K	V	P	S	Y	L	E	I	R	K	D	L	P
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		K	P	E	Y	R	G	K	V	D	E	E	D	I	I	E	W	V	R	E	R	I	.	.	.	.	.	S	R	E	V	E	F	V	E	E	L	P
Template Known Secondary structure			S	T	T	T	T	S												T	T		.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.						.	.	.	510	.	.	.	.	.	.	.