 |
Job Description | P31552 | Confidence | 27.10% | Date | Thu Jan 5 11:48:13 GMT 2012 |
Rank | 59 | Aligned Residues | 70 |
% Identity | 11% | Template | c2zy3A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:l-aspartate beta-decarboxylase; |
PDBTitle: dodecameric l-aspartate beta-decarboxylase
|
Resolution | 2.50 Å |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | I | N | R | T | A | N | L | F | Y | T | L | G | . |
I | R | K | G | D | K | V | A | L | H | L | D | N | C | P | E | F | I | F | C | W | . |
F | G | L | A | K | I | G | A | I | M | V | P | I | N | A | R | . |
. |
. |
. |
L | L | C | E | E | S | A | W | I | L | Q | N | S | Q | A | C | L | L | V | T |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |
| . |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . |
|
|   |   |   |   |
|   |   |   |
|
|
|   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | A | M | A | Y | I | F | E | S | L | K | L | N | G | L | L | K | A | G | D | K | V | A | I | G | M | P | V | F | T | P | Y | I | E | I | P | E | L | A | Q | Y | A | L | E | E | V | A | I | N | A | D | P | S | L | N | W | Q | Y | P | D | S | E | L | D | K | L | K | . |
D | P | A | I | K | I | F | F | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| T | T |
|  |  |  |  |  |  | S |
|
| T |  |  |  |  | S | T | T | S | T | T | T |
|
|  |  |  |  |  |  |
| B | G | G | G | T | S | B |
|
|  |  |  |  | G | G | G | G | . |
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|