|   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | C | Q | S | Q | V | W | I | V | M | R | Q | N | A | Q | G | I | I | . |
. |
. |
E | L | Q | G | D | S | D | A | A | I | V | K | G | L | I | A | V | V | F | I | L | Y | D | Q | M | T | P | Q | D | I | V | N | F | D | V | R | P | W | F | E | K | M | A | L | T | Q | H | L | T | P | S | R | S | Q | G | L | E | A |
Query Conservation |   |
  |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   | . | . | . |   |
|   |   |
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |   | . |
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |
|
|   |
|
Template Sequence |   |
P | A | C | G | D | V | M | K | L | Q | I | Q | V | D | E | K | G | K | I | V | D | A | R | F | K | T | F | G | C | G | S | . |
A | I | A | S | S | S | L | A | T | E | W | V | K | G | K | T | V | E | E | A | L | T | I | K | N | T | D | I | A | K | E | L | C | . |
. |
. |
. |
L | P | P | V | K | L | H | C | S | M | L |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |  |  |  |  |
| S | S | S | B |  |  |  |  |  |  |  |
|
| S |
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | B |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T | . | . | . | . |
|
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | R | A | I | R | A | K | A | A | A | L |
Query Conservation |   |
|
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
A | E | D | A | I | K | A | A | L | A | D | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . |
  |