 |
Job Description | P76194 | Confidence | 4.02% | Date | Thu Jan 5 12:20:21 GMT 2012 |
Rank | 96 | Aligned Residues | 67 |
% Identity | 12% | Template | d1w6ka2 |
SCOP info | alpha/alpha toroid
| Terpenoid cyclases/Protein prenyltransferases
| Terpene synthases
|
Resolution | 2.1 |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
. | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | I | I | E | L | G | Q | R | L | P | E | L | R | D | E | D | R | S | P | Q | N | S | I | Q | G | C | Q | S | Q | V | W | I | V | M | R | Q | N | A | Q | G | . |
. |
I | I | E | L | Q | G | D | S | D | . |
A | A | I | V | K | G | L | I | A | V | V | F | I | L | Y | D | Q | M | T | P | Q | D | I | V | N |
Query Conservation |   |
  |   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |
| . | . |   |   |   |
|   |   |
|
|
| . |
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
G | L | L | I | T | C | H | V | A | R | I | P | L | P | A | G | Y | R | E | E | I | V | R | . |
. |
. |
. |
. |
. |
. |
. |
Y | L | R | S | V | Q | L | P | D | G | G | W | G | L | H | I | E | D | K | S | T | V | F | G | T | A | L | N | Y | V | S | L | R | I | L | G | V | G | P | D | D | P | D | L | V | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  | S |
| T | T | S |
| B |
| S | B | T | T | S |
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|