 |
Job Description | P76194 | Confidence | 9.01% | Date | Thu Jan 5 12:20:21 GMT 2012 |
Rank | 56 | Aligned Residues | 37 |
% Identity | 30% | Template | d1osha_ |
SCOP info | Nuclear receptor ligand-binding domain
| Nuclear receptor ligand-binding domain
| Nuclear receptor ligand-binding domain
|
Resolution | 1.80 |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | P | D | K | E | K | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | N | F | L | R | C | A | N | W | E | E | K | . |
Y | L | Y | I | I | E | L | G | Q | R | L | P | E | L | R | D |
Query Conservation |   |
  |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |
|
|
|   |
| . |
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|   |   |
Template Sequence |   |
L | T | P | D | Q | Q | T | L | L | H | F | I | M | D | S | Y | N | K | Q | R | M | P | E | N | F | L | I | L | T | E | M | A | T | N | H | V | Q | V | L | V | E | F | T | K | K | L | P | G | F | Q | T |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|