Return to main results Retrieve Phyre Job Id

Job DescriptionP76194
Confidence7.96%DateThu Jan 5 12:20:21 GMT 2012
Rank58Aligned Residues46
% Identity11%Templatec2w3cA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80........ .90.........100....... ..110......
Predicted Secondary structure 


...






.




Query SS confidence 

















. . .


















.








Query Sequence  GDSDAAIVKGLIAVVFIL. . . YDQMTPQDIVNFDVRPWFE. KMALTQHLT
Query Conservation   



 




 


   ...  
 

 


  
      . 


   

Alig confidence 

















...


















.








Template Conservation         
 

 
 


    
         
      
   

 
    
Template Sequence  LGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIE
Template Known Secondary structure 
TTTTT

S

SSS
T
Template Predicted Secondary structure 














Template SS confidence 

















































   530.........540.........550.........560.........570.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions