Return to main results Retrieve Phyre Job Id

Job DescriptionP28634
Confidence34.38%DateWed Jan 25 15:20:47 GMT 2012
Rank15Aligned Residues33
% Identity18%Templated1bkba1
SCOP infoSH3-like barrel Translation proteins SH3-like domain eIF5a N-terminal domain-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110...... ...120.........130.......
Predicted Secondary structure 



....







Query SS confidence 











. . . .




















Query Sequence  VELKEVVCHKDS. . . . VILKLGSLDLVDGTPVVDIKP
Query Conservation 
 
  

    
....  
 
 
 
 










Alig confidence 











....




















Template Conservation 



 




 



 

  
  







 
   
Template Sequence  CRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLP
Template Known Secondary structure 

STTS

TTT

Template Predicted Secondary structure 















Template SS confidence 




































   30.........40.........50.........60......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions