Return to main results Retrieve Phyre Job Id

Job DescriptionP28634
Confidence89.05%DateWed Jan 25 15:20:47 GMT 2012
Rank10Aligned Residues71
% Identity14%Templatec3oeiH_
PDB info PDB header:toxin, protein bindingChain: H: PDB Molecule:relk (toxin rv3358); PDBTitle: crystal structure of mycobacterium tuberculosis reljk (rv3357-rv3358-2 relbe3)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190... ..... .200.........210... ......220.........230..
Predicted Secondary structure 


...



....






.

Query SS confidence 































. . .




. . . .














.


















Query Sequence  AVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQ. . . DPRPA. . . . YRKGEETGKTYAVWL. HDFNVRWRVTDAGFEVFAL
Query Conservation   
 
   
   
             
  

  ...



 ....
 
 
     
   
.    
          
  
Alig confidence 































...




....














.


















Template Conservation   
  
  
 

 
   
   
  


  

  
  

  
 



 


   
  
 

  
 



 
    
 
   
Template Sequence  SVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLKA
Template Known Secondary structure 


TTSSSS



GGGTT
SSSS

SSS
Template Predicted Secondary structure 
























Template SS confidence 














































































   3......10.........20.........30.........40.........50.........60.........70.........80.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions