Job Description P28634 Confidence 100.00% Date Wed Jan 25 15:20:47 GMT 2012 Rank 3 Aligned Residues 131 % Identity 38% Template c2nv4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0066 protein af_0241; PDBTitle: crystal structure of upf0066 protein af0241 in complex with2 s-adenosylmethionine. northeast structural genomics3 consortium target gr27 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	I	G	V	I	R	S	P	Y	K	E	K	F	A	V	P	R	Q	P	G	L	V	K	S	A	N	G	E	L	H	L	I	A	P	Y	N	Q	A	D	A	V	R	G	L	E	A	F	S	H	L	W	I	L	F	V	F	H	Q	T	M	E	G	G	W	R	P	T	V	R	P	P	R	L	G	G	N	A	R
Query Conservation
Alig confidence																											.												.	.																							.	.												.	.
Template Conservation																											.												.	.																							.	.												.	.
Template Sequence		L	K	P	I	G	V	V	K	S	P	F	K	T	Q	N	D	A	P	R	Q	G	R	F	S	D	.	A	V	S	E	I	A	I	F	D	E	Y	.	.	A	D	G	L	H	K	I	E	N	L	R	H	I	I	V	L	Y	W	X	D	K	A	.	.	S	R	D	K	L	R	V	V	P	P	G	.	.	E	T	E	E
Template Known Secondary structure											S			S	T	T	T	S		S	S	G	G	G			.												.	.		G	G	G	T	T	G	G	G		S									T	T	S	.	.		S	S							T	T	.	.			S
Template Predicted Secondary structure																											.												.	.																							.	.												.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.			.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	V	F	A	T	R	S	T	F	R	P	N	P	I	G	M	S	L	V	E	L	K	E	V	V	C	H	K	D	S	V	I	L	K	L	G	S	L	D	L	V	D	G	T	P	V	V	D	I	K	P	Y	L	P	F	A	E	S	L	P	D
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		R	G	V	F	T	T	R	S	P	S	R	P	N	P	I	G	L	C	V	V	E	I	L	E	V	E	.	.	.	.	R	N	R	L	K	V	R	W	L	D	A	L	D	G	S	P	V	I	D	I	K	K	Y	S	P	E	I	D	C	V	N	Q
Template Known Secondary structure				G	G	G	S			S		S	S	S														.	.	.	.	T	T						S					T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions