Job Description P37330 Confidence 99.66% Date Thu Jan 5 11:55:16 GMT 2012 Rank 6 Aligned Residues 270 % Identity 16% Template c3r4iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of a citrate lyase (bxe_b2899) from burkholderia2 xenovorans lb400 at 2.24 a resolution Resolution 2.24 Å

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		257	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		N	D	V	I	V	E	A	A	I	.	.	.	.	S	T	I	L	D	C	E	D	S	V	A	A	V	D	A	E	D	K	I	L	L	Y	R	N	L	L	G	L	M	Q	G	T	L	Q	E	K	M	E	K	N	G	R	Q	I	V	R	K	L	N	D	D	R	H	Y	T	A	A	D	G	S	E	I	S	L	H	G	R
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.													.	.	.																	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.																	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		K	S	L	A	L	Q	Q	Q	L	G	P	V	F	D	I	T	L	D	C	E	D	G	A	Q	V	.	.	.	G	R	E	A	Q	H	A	E	L	V	A	S	L	L	G	S	.	.	.	.	.	E	H	D	R	F	G	R	V	G	V	R	I	H	D	F	D	H	A	H	W	R	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T							S	S	T	T	S		S	.	.	.	S													T	T	S	.	.	.	.	.	S	S			S	S									T	T	S	T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.																	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		S	L	L	F	I	R	N	V	G	H	L	M	T	I	P	V	I	W	D	S	E	G	N	E	I	P	E	G	I	L	D	G	V	M	T	G	A	I	A	L	Y	D	L	K	.	V	Q	K	N	S	R	T	G	S	V	Y	I	V	K	P	K	M	H	G	P	Q	E	V	A	F	A	N	K	L	F	T	R	I	E	T
Query Conservation																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	R	L	I	L	R	A	A	K	R	A	P	A	Y	I	T	L	P	K	I	R	H	V	H	D	A	A	E	X	V	A	F	I	E	A	T	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S			S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																											98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	G	M	A	P	N	T	L	K	M	G	I	M	D	E	E	R	R	T	S	L	N	L	R	S	C	I	A	Q	A	R	N	R	V	A	F	I	N	T	G	F	L	D	R	T	G	D	E	M	H	S	V	M	E	A	G	P	M	L	R	K	N	Q	M	K	S	T	P	W	I	K	A	Y	E	R	N	N	V	L
Query Conservation
Alig confidence							.																						.	.																					.	.
Template Conservation							.																						.	.																					.	.
Template Sequence		E	L	G	I	A	.	Q	P	V	P	V	Q	L	L	V	E	T	H	G	A	L	T	R	V	F	D	L	.	.	A	A	L	P	G	V	E	A	L	S	F	G	L	X	D	F	V	S	A	H	.	.	D	G	A	I	P	D	T	A	X	R	S	P	G	Q	F	D	H	P	L	V	R	R	A	K	L	E	I	S	A
Template Known Secondary structure			T	T		S	.	S										S						T					.	.		T		T	T														T	T	.	.	T	T	S	S		G	G	G	G	S	T	T					S
Template Predicted Secondary structure							.																						.	.																					.	.
Template SS confidence
		137	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	F	C	G	L	R	G	K	A	Q	I	G	K	G	M	W	A	M	P	D	L	M	A	D	M	Y	S	Q	K	G	D	Q	L	R	A	G	A	N	T	A	W	V	P	S	P	T	A	A	T	L	H	A	L	H	Y	H	Q	T	N	V	Q	S	V	Q	A	N	I	A	Q	T	E	F	N	A	E	F	E	P
Query Conservation
Alig confidence			.	.	.																																																						.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																																						.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	C	H	A	Y	G	K	V	P	S	H	N	V	S	T	E	V	R	D	X	S	V	V	A	N	D	A	A	R	A	R	N	E	F	G	Y	T	R	X	W	S	I	H	P	A	Q	I	E	A	I	V	A	A	F	.	.	.	.	A	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.	.	.				T	T											S	S															T	T			S					S	S											T	.	.	.	.	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.																																																						.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	D	L	L	T	I	P	V	A	E	N	A	N	W	S	A	Q	E	I	Q	Q	E	L	D	N	N	V	Q	G	I	L	G	Y	V	V	R	W	V	E	Q	G	I	G	C	S	K	V	P	D	I	H	N	V	A	L	M	E	D	R	A	T	L	R	I	S	S	Q	H	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	T	T	A	T	E	I	L	L	A	A	Q	S	A	Q	W	G	P	T	R	Y	.	.	.	.	.	H	D	T	L	H	D	R	A	S	Y	R	Y	Y	W	S	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	T	S					.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
																												270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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