Return to main results Retrieve Phyre Job Id

Job DescriptionP37330
Confidence95.98%DateThu Jan 5 11:55:16 GMT 2012
Rank17Aligned Residues121
% Identity13%Templatec3qz6A_
PDB info PDB header:lyaseChain: A: PDB Molecule:hpch/hpai aldolase; PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   384.....390.........400........ .410.........420.........430.........440...
Predicted Secondary structure 





....................









Query SS confidence 
























. . . . . . . . . . . . . . . . . . . .


































Query Sequence  GSVYIVKPKMHGPQEVAFANKLFTR. . . . . . . . . . . . . . . . . . . . IETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQAR
Query Conservation 



   




  








  ....................

  
















 












Alig confidence 
























....................






























..

Template Conservation 

 

  
 
 
 
 
   
 
 

 
 
 

                     
    
  



  

    

 ..
 
Template Sequence  GAEGFXIPGVQSAETXRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIXAQIEHVKAVEDIDSIL. . AV
Template Known Secondary structure  T

TT

SS
TTT






GGGGTT



TT


T..TS
Template Predicted Secondary structure 































..

Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160 ..
 
   444.....450.........460.........470.........480.........490.........500.........510.........520.
Predicted Secondary structure 

























Query SS confidence 













































































Query Sequence  NRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQ
Query Conservation 

 












 



      

  
 
  


 

  


 
   





 






 

   
 

 
Alig confidence 















...........





















...






.

















Template Conservation   


 
 


 


 
...........

       
 
  
   
  
...
   
  . 
                
Template Sequence  QGVDAVIFGPRDLSND. . . . . . . . . . . LGIIGQTEHPKVYECYEKVYRA. . . ADRQGVV. KGFFTAADAAKXGWAVER
Template Known Secondary structure  TT


...........TT
TT
TT
...T
.SS
GGGGT
Template Predicted Secondary structure 





...........







...


.



Template SS confidence 













































































   163......170........ .180.........190.........200 ....... ..210.........220.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions