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Job DescriptionP37330
Confidence100.00%DateThu Jan 5 11:55:16 GMT 2012
Rank3Aligned Residues395
% Identity21%Templatec3cuzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design
Resolution1.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320......... 330.........340. ....
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Query Sequence  ILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISL. HGRSLLFIRNVG. HLMT
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Template Sequence  MADFEDSLAP. DWNKVI. . . . . . . . . . . . . . . . . . . DGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPE
Template Known Secondary structure  SSTT


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   115....120.... .....130 .........140.........150.........160.........170....
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
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Query Sequence  IPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIM
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Template Sequence  KHVTWR. . GEAIPGSLFDFAL. . . YFFHNYQ. ALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLL
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   175....180 .........190... ......200 .........210.........220.........230.........240........
 
   426...430.........440.........450.........460.........470. ........480.........490.........500..
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Query Sequence  DEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPML. . . RKNQMKSTPWIKAYERNNVLSGLFCGLRGKA
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Template Sequence  IETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKT. . . CHKRGAF
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STSTTTT

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   249250.........260.........270.........280.........290.........300.........310........ .320.....
 
   503......510.. .......520.........530.........540.........550 .........560.........570...
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Query Sequence  QIGKGMWAMP. . . . . . . . DLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQ. TNVQSVQANIAQTEFNAEFEPLL
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Template Sequence  AMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMRE. . . QDAPITA
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SSGGG
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   326...330.........340.........350.........360.........370.........380.........390..... ....400..
 
   574.....580.........590.........600.........610.........620.........630.........640.........650...
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Query Sequence  DDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTK
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Template Sequence  DQLLAPCDG. . . . . . . ERTEEGMRANIRVAVQYIEAWI. SGNGCVPI. . . . . YGLMEDAATAEISRTSIWQWIHHQKTLS
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   403......410. ........420.........430... ......440. ........450.........460.........
 
   654.....660......... 670.........680.........690.........700.......
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Query Sequence  EQVQASLENMAKVVDQ. . . . . . QNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGY
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Template Sequence  NGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGY
Template Known Secondary structure  TS
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   470.........480.........490.........500.........510.........520.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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