 |
Job Description | P75992 | Confidence | 2.53% | Date | Thu Jan 5 12:17:05 GMT 2012 |
Rank | 93 | Aligned Residues | 28 |
% Identity | 29% | Template | c4a1eU_ |
PDB info |
PDB header:ribosome | Chain: U: PDB Molecule:rpl35; |
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1
|
Resolution | 3.52 Å |
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | Q | L | L | V | M | K | S | A | E | E | D | A | F | R | . |
. |
. |
. |
. |
. |
. |
R | D | L | I | D | S | I | I | R | D | F | S |
Query Conservation |   |
  |   |
|
|
|   |
|   |
|   |
|   |
|   |   |
| . | . | . | . | . | . | . |
|   |
|
|   |   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
L | S | Q | L | R | I | A | K | I | A | G | G | T | A | N | K | L | G | R | I | G | I | V | R | K | A | I | A | K | Y | L | T | I | I | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|