Return to main results Retrieve Phyre Job Id

Job DescriptionP75992
Confidence42.64%DateThu Jan 5 12:17:05 GMT 2012
Rank1Aligned Residues49
% Identity20%Templatec2oxlA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:hypothetical protein ymgb; PDBTitle: structure and function of the e. coli protein ymgb: a protein critical2 for biofilm formation and acid resistance
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60
Predicted Secondary structure 








Query SS confidence 
















































Query Sequence  EITGQAVLQILRMKINFSLQTLIKQLLVMKSAEEDAFRRDLIDSIIRDF
Query Conservation 







 


    

  

  


 
 
 
 
  

 

  



 
Alig confidence 
















































Template Conservation   

  

  

 

  







 

  



 

   

 
  



Template Sequence  AVLGQAVTNLXLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
Template Known Secondary structure  TT


ST


Template Predicted Secondary structure 






Template SS confidence 
















































   32.......40.........50.........60.........70.........80
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions