Return to main results Retrieve Phyre Job Id

Job DescriptionP77129
Confidence7.38%DateThu Jan 5 12:25:34 GMT 2012
Rank39Aligned Residues20
% Identity20%Templatec1zc1A_
PDB info PDB header:protein turnoverChain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   218.220.........230.......
Predicted Secondary structure 



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Query Sequence  VMDFLSVTDQFFLNLAMAYC
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Template Sequence  VLEFIAEEGRVYLPQWMMET
Template Known Secondary structure 

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   84.....90.........100...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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