|   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | W | P | A | L | Q | P | G | A | K | K | V | I | V | L | F | H | R | . |
. |
G | H | E | H | S | G | R | L | Q | H | L | V | D | E | L | A | M | P | D | T | A | F | Y | A | W | D | A | R | G | H | G | K | S | S | G | P | R | G | Y | S | P | S | L | A | R | S | V | R | D | V | D | E | F | V | R | F | A | A | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
| . | . |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   | . |   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   | . |
Template Sequence |   |
L | L | A | G | G | P | T | D | E | G | R | A | V | L | V | G | C | T | G | T | A | A | N | G | G | P | H | E | F | L | R | L | S | T | S | F | Q | E | E | . |
R | D | F | L | A | V | P | L | P | G | Y | G | T | G | G | T | A | L | L | P | . |
A | D | L | D | T | A | L | D | A | Q | A | R | A | I | L | R | A | A | . |
Template Known Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| T | T |
| S | T | T | T | T |  |  |  |  |  | T | T | T | T | T | . |
|
|  |  |  |  |
|
| T | T |
|
| B |
|
| B |
|
|  |  | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | Q | V | G | L | E | E | V | V | V | I | A | Q | S | V | G | A | V | L | V | A | T | W | I | H | D | . |
. |
. |
. |
Y | A | P | A | I | R | G | L | V | L | A | S | P | A | F | K | V | K | L | Y | V | P | L | A | R | P | A | L | A | L | W | H | R | L | R | G | L | F | F | I | N | S | Y | V | K | G | R | Y | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   | . | . | . | . |   |
|   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
G | D | A | P | V | V | L | L | G | H | S | G | G | A | L | L | A | H | E | L | A | F | R | L | E | R | A | H | G | A | P | P | A | G | I | V | L | V | D | P | Y | P | P | G | H | Q | E | P | I | E | V | W | S | R | Q | L | G | E | G | L | F | A | G | E | L | E | P | M | S | D | A | R | L | L | A | M |
Template Known Secondary structure |   |
. | . | . | . | T | T | S |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |  |  |  |  |  | S |
|
|
| T | T |
|
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | D | R | Q | R | G | A | S | F | N | N | D | P | L | I | T | R | A | I | A | V | N | I | L | L | D | L | Y | K | T | S | E | R | I | I | R | D | A | A | A | I | T | L | P | T | Q | L | L | I | S | G | D | D | Y | V | V | H | R | Q | P | Q | I | D | F | Y | Q | R | L | R | S | P | L | K | E | L | H | L | L | P |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |
|   |   |
|   |
Template Sequence |   |
G | R | Y | A | R | F | L | A | G | P | R | P | G | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | S | A | P | V | L | L | V | R | A | S | E | P | L | G | D | W | Q | E | E | R | G | D | W | R | A | H | W | D | L | P | . |
H | T | V | A | D | V | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S |
|  |  |  |  |  |  | S | S |
| S | S |
|
|
| G | G | G |
|
|
| S |
|
|
| S | S |
| . | S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . |
  |
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | Y | H | D | T | L | G | E | E | N | R | A | L | A | F | E | K | M | Q | S | F | I | S | R | L |
Query Conservation |   |
|   |   |
|   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   | . |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
G | D | H | F | T | M | M | R | . |
D | H | A | P | A | V | A | E | A | V | L | S | W | L | D | A | I |
Template Known Secondary structure |   |
S |
| T | T |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | |
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
  |