Job Description P76092 Confidence 99.74% Date Thu Jan 5 12:18:46 GMT 2012 Rank 283 Aligned Residues 192 % Identity 17% Template d1p91a_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA methyltransferase RlmA Resolution 2.80

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	Q	P	Q	G	S	N	A	F	G	R	L	V	D	K	I	Y	L	N	S	V	G	W	R	G	I	R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L
Query Conservation
Alig confidence																																.	.	.									.	.	.	.	.																													.
Template Conservation																																.	.	.									.	.	.	.	.																													.
Template Sequence		R	S	R	D	P	G	D	S	A	E	X	X	Q	A	R	R	A	F	L	D	A	G	H	Y	Q	P	L	R	D	A	.	.	.	I	V	A	Q	L	R	E	R	.	.	.	.	.	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	.	I	T	T	F	G
Template Known Secondary structure			S				S	S	S												T	T	T	T	T							.	.	.									.	.	.	.	.	S		T	T								T		T	T	S	T	T							T		T	T	.	S
Template Predicted Secondary structure																																.	.	.									.	.	.	.	.																													.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I
Query Conservation
Alig confidence																		.	.	.	.	.	.										.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.										.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	.	.	.	.	.	.	Q	V	T	F	C	V	A	S	S	.	.	.	H	R	L	P	F	S	D	T	S	X	D	A	I	I	R	I	Y	A	P	C	K	.	.	.	.	.	.	.	.	.	.	A	E	E	L	A	R	V	V	K	P	G	G	W	V	I
Template Known Secondary structure				S													T	.	.	.	.	.	.	T	S							T	.	.	.	T	S		S	B		T	T									S					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.										.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.																																		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	T	P	G	P	R	H	L	X	E	L	K	G	L	I	Y	N	E	V	H	L	H	A	P	H	A	E	Q	L	E	G	F	T	L	Q	Q	S	A	E	L	C	Y	P	X	R	L	R	G	D	E	A	V	A	L	L	Q	X	T	P	F	A	W	R	A	K	P	E	V	W	Q	T	L	A	A	K	E	V	F	D
Template Known Secondary structure							T	T	T	T					T	T	T		S	S												T	T																										T	S	T	T	G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	Q	R	I	D	E	W	G	I	F	T	V	S	M	A	V	R	R
Query Conservation
Alig confidence					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		C	Q	T	.	.	.	.	.	.	D	F	N	I	H	L	W	Q	R	S
Template Known Secondary structure					.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		256	.	.							.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions