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Job DescriptionP76092
Confidence99.96%DateThu Jan 5 12:18:46 GMT 2012
Rank41Aligned Residues242
% Identity16%Templatec3qvmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:olei00960; PDBTitle: the structure of olei00960, a hydrolase from oleispira antarctica
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.. .......90.........100......
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Query Sequence  PGAKKVIVLFHRGHEHSGRLQHLVDELAMPDTAFYAWDARGHGKSSGPRGYSP. . . SLARSVRDVDEFVRFAASDSQVGL
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Template Sequence  GGGEKTVLLAHGFGCDQNXWRFXLPELEK. QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL. . . . . . DL
Template Known Secondary structure 
SS


TT

GGGGTTTT.TS


TTSTTS
GGG

TTGGGST......T
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   24.....30.........40.........50.. .......60.........70.........80.........90.... ..
 
   107..110.........120.........130.........140......... 150.........160.........170........
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Query Sequence  EEVVVIAQSVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVP. . . . . . . . LARPALALWHRLRGLFFINSYVKGRYLTH
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Template Sequence  VNVSIIGHSVSSIIAGIASTHVGDRISDITXICPSPCFXNFPPDYVGGFERDDLEELINLXDKNYIGWANYLAPLVXGAS
Template Known Secondary structure 
STGGGS

SBSBTTT
SB


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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  DRQRGASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGF
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Template Sequence  HSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYXAENI. . PNSQLELIQAE
Template Known Secondary structure  S
S
S
B
GGGGGG

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   177..180.........190.........200.........210.........220.........230.........240... ......250....
 
   259260.........270.........280.
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Query Sequence  YHDTLGEENRALAFEKMQSFISR
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Template Sequence  GHCLHXTD. AGLITPLLIHFIQN
Template Known Secondary structure  SS

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   255....260.. .......270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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