Job Description P76092 Confidence 99.50% Date Thu Jan 5 12:18:46 GMT 2012 Rank 406 Aligned Residues 146 % Identity 11% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P
Query Conservation
Alig confidence																		.	.																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.										.
Template Conservation																		.	.																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.										.
Template Sequence		T	Y	T	L	M	D	A	L	E	R	E	G	L	E	M	K	.	.	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	R	.	.	.	.	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	.	.	.	.	N	L	V	R	A	D	L	L	C	.
Template Known Secondary structure													T			S		.	.						T		T	T								T	T	T	.	.	.	.	S							S							T		S	S	S	.	.	.	.	.	.	.	.	.	.						S	T	T	T	.
Template Predicted Secondary structure																		.	.																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.											.	.	.	.	.	.	70	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.							500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	.	.	.	.	.	.	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M
Query Conservation																														.	.	.	.	.	.
Alig confidence		.	.	.																										.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	I	N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	T	S		G	G	G		S									B	T	T				T	T	T	B			G	G	G													S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.			.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	.	.	D	K	C	T	Q	R	I	D	E	W	G	I	F	T	V	S	M	A	V	R
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		E	A	N	R	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V	R	K	I	L	G	E	T	V	Y	I	I	K	G	E	K
Template Known Secondary structure		G	G	G												T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions