Job Description P76092 Confidence 99.80% Date Thu Jan 5 12:18:46 GMT 2012 Rank 225 Aligned Residues 250 % Identity 15% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	S	A	D	R	W	R	L	L	S	G	G	P	V	P	L	S	P	V	D	L	A	Y	R	F	M	R	K	A	M	K	L	F	G	T	H	S	S	G	L	H	L	G	M	.	S	T	G	F	D	S	G	S	S	L	D	Y	V	Y	Q	N	Q	P	Q	G	S	N	A	F	G	R	L	V	D	K	I	Y	L	N	S
Query Conservation																																														.
Alig confidence																																														.																																.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	A	P	V	C	K	F	L	T	P	N	E	D	G	V	S	M	A	A	L	A	L	M	N	Q	D	K	V	L	M	E	S	W	Y	Y	L	K	D	A	V	L	D	G	G	I	P	F	N	K	A	Y	G	M	S	A	F	E	Y	H	G	T	D	P	R	F	N	R	V	F	N	E	G	M	K	N	H	.	.	.	.
Template Known Secondary structure				G	G	G	G	G	S	S			T	T	S			T								T	S					G	G	G	G	G									S								S	S							T	T																.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	W	R	G	I	R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																										.												.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																										.												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	I	I	I	T	K	K	L	L	E	L	Y	H	G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	P	T	.	I	K	G	V	N	F	D	L	P	H	V	.	.	.	.	.	.	.	.	I	S	E	A	P	Q	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.														T	T	T	T		S						T		T	T	S											T	T	.												.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																										.												.	.	.	.	.	.	.	.
Template SS confidence
														181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.						.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		G	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	.	.	.	.	.	P	W	H	P	Q	L	E	M	I	A	G	V
Query Conservation																																																																	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																			.																											.	.	.	.	.
Template Conservation														.	.	.	.	.	.																			.
Template Sequence		P	G	V	T	H	V	G	G	D	M	F	K	.	.	.	.	.	.	E	V	P	S	G	D	T	I	L	M	K	W	I	L	H	D	W	S	.	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S	S	Q	G	V	F	H
Template Known Secondary structure		T	T						S		T	T	T	.	.	.	.	.	.						S						S		G	G	G	B		.															S		T	T										B		S	S			S	S
Template Predicted Secondary structure														.	.	.	.	.	.																			.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R	I	D	E	W	G	I	F	T	V	S	M	A	V	R
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		V	D	M	I	M	L	A	H	N	P	G	G	R	E	R	Y	E	R	E	F	Q	A	L	A	R	G	A	G	F	T	G	V	K	S	.	T	Y	I	Y	A	N	A	W	A	I	E	F	T	K
Template Known Secondary structure										S	S	B					B												T							.					T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions