Job Description P76092 Confidence 99.72% Date Thu Jan 5 12:18:46 GMT 2012 Rank 299 Aligned Residues 171 % Identity 15% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	.	.	.	G	R	V	R	F	E	Q	G	D	A	F	N	P	E
Query Conservation																																																																	.	.	.
Alig confidence																.																						.																											.	.	.											.	.	.
Template Conservation																.																						.																																								.	.	.
Template Sequence		K	D	E	L	T	E	I	I	G	Q	F	D	R	V	.	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	.	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G	L	S	N	V	V	F	V	I	A	A	A	.	.	.	E
Template Known Secondary structure											T	S	S			.					T		T	T	S											T	T	.								S		G	G	G	G								T	S		G	G	G	T			S	S								T	.	.	.	T
Template Predicted Secondary structure																.																						.																																								.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.
		473	.	.	.		.	.	.	480	.	.	.	.	.	.	.					.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure						.												.	.	.	.
Query SS confidence						.												.	.	.	.
Query Sequence		E	L	S	A	.	L	T	P	R	P	T	L	A	I	V	S	.	.	.	.	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V
Query Conservation						.												.	.	.	.
Alig confidence						.												.	.	.	.										.	.
Template Conservation																															.	.
Template Sequence		S	L	P	F	E	L	K	N	I	A	D	S	I	S	I	L	F	P	W	G	T	L	L	E	Y	V	I	K	P	.	.	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	Y	F	L	S	E	Q	Y	K	A	E	L	S	N	S	G	F	R	I	D	D	V	K	E
Template Known Secondary structure		S			G	G	G	T	T									S											T	T	.	.											T																			S									T	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		548	.	550	.	.	.	.	.					.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		R	S	Q	G	E	M	D	S	.	.	.	.	L	V	R	D	A	G	F	D	K	C	T	Q	R	I	D	E	W	G
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	D	N	E	Y	V	K	Q	F	N	S	L	W	A	K	R	L	A	F	G	R	K	R	S	F	F	R	V	S	G
Template Known Secondary structure				G	G	G	G	G	G			S								T	S	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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