Job Description P76092 Confidence 99.75% Date Thu Jan 5 12:18:46 GMT 2012 Rank 273 Aligned Residues 164 % Identity 12% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	G	R	V	R	F	E
Query Conservation
Alig confidence								.	.	.																																				.	.																																	.	.
Template Conservation								.	.	.																																				.	.																																	.	.
Template Sequence		V	S	R	G	G	L	.	.	.	K	L	E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	.	.	G	A	K	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	E	Q	F	N	.	.
Template Known Secondary structure		S	S	T	T			.	.	.									T	T				T	T							T		T	T	S									T	.	.	T		S							S	S										T		T	T						S			.	.
Template Predicted Secondary structure								.	.	.																																				.	.																																	.	.
Template SS confidence
		37	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V
Query Conservation
Alig confidence		.	.	.																													.	.	.	.	.	.																				.	.	.	.
Template Conservation		.	.	.																													.	.	.	.	.	.																				.	.	.	.
Template Sequence		.	.	.	F	R	N	A	V	L	A	D	F	E	Q	G	R	P	S	F	T	S	I	D	V	S	F	I	S	L	D	L	.	.	.	.	.	.	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	.	.	.	.	K	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K
Template Known Secondary structure		.	.	.	G	G	G			G	G	G			S				S							S	S	S		G	G	G	.	.	.	.	.	.	T								S		T	T								.	.	.	.						S
Template Predicted Secondary structure		.	.	.																													.	.	.	.	.	.																				.	.	.	.
Template SS confidence
					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	Q	X	T	I	E	K	V	L	K	T	A	T	Q	L	G	F	S	V	K	G	L	T
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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