Job Description P76092 Confidence 99.84% Date Thu Jan 5 12:18:46 GMT 2012 Rank 183 Aligned Residues 175 % Identity 11% Template c3ofkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) Resolution 1.85 Å

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	D	K	I	Y	L	N	S	V	G	W	R	G	I	R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G
Query Conservation
Alig confidence																					.	.																																								.	.	.
Template Conservation																					.	.																																								.	.	.
Template Sequence		Q	S	L	E	R	E	L	A	N	D	D	P	W	R	L	D	D	N	P	.	.	F	E	R	E	R	H	T	Q	L	L	R	L	S	L	S	S	G	A	V	S	N	G	L	E	I	G	C	A	A	G	A	F	T	E	K	L	A	P	H	.	.	.	C	K	R	L	T	V	I	D	V	M	P	R	A	I	G	R	A
Template Known Secondary structure									T	S	S	S	G	G	G	T	T	T			.	.														T	T	T	S	S										T	T	S							G	G	G	.	.	.									S
Template Predicted Secondary structure																					.	.																																								.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	M	I	A	Q	R	G	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E
Query Conservation
Alig confidence										.	.	.														.	.	.	.
Template Conservation										.	.	.														.	.	.	.
Template Sequence		C	Q	R	T	K	R	W	S	.	.	.	H	I	S	W	A	A	T	D	I	L	Q	F	S	.	.	.	.	T	A	E	L	F	D	L	I	V	V	A	E	V	L	Y	Y	L	E	D	M	T	Q	M	R	T	A	I	D	N	M	V	K	M	L	A	P	G	G	H	L	V	F	G	S	A	R	D	A	T	C	R	R
Template Known Secondary structure					T	T	T		S	.	.	.	S								T	T	T			.	.	.	.		S										S		G	G	G	S	S	S														T
Template Predicted Secondary structure										.	.	.														.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R	I	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	H	V	A	G	A	E	T	V	I	T	I	L	T	E	A	L	T	E	V	E	R	V	Q	C	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S														S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions