Job Description P76092 Confidence 99.95% Date Thu Jan 5 12:18:46 GMT 2012 Rank 69 Aligned Residues 194 % Identity 18% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	G	W	R	G	I	R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	.	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M
Query Conservation																																																		.
Alig confidence																								.	.	.	.	.	.																					.						.
Template Conservation																								.	.	.	.	.	.																											.
Template Sequence		P	A	V	L	A	T	R	E	R	H	G	H	F	R	R	A	L	Q	R	H	L	R	.	.	.	.	.	.	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	.	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L
Template Known Secondary structure																								.	.	.	.	.	.	T	T						T	T		T	T						T	S			T	T		T	T	.								S													T	T	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.																											.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		A	G	Q	I	T	L	H	R	Q	D	A	W	K	L	D	.	.	.	.	T	R	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W	D	X	Q	A
Template Known Secondary structure		G	G	G								G	G	G			.	.	.	.			S									S	S	G	G	G																																	T	T	T		T	T					G	G	G
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
				526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R	I	D	E	W	G	I	F	T	V	S	M	A	V	R	R
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		I	D	P	H	D	L	Q	L	Q	Q	L	V	F	T	R	L	I	Q	P	R	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E	D	D	R	A	R	L	F	P	T	V	I	A	R	K	P
Template Known Secondary structure		S															T	T			S																	T	T										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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