Job Description P76092 Confidence 99.96% Date Thu Jan 5 12:18:46 GMT 2012 Rank 43 Aligned Residues 249 % Identity 10% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		S	R	I	P	G	E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	P	G	A	K	K	V	I	V	L	F	H	R	G	H	E	H	S	.	G	R	L	Q	H	L	V	D	E	L	A	M	P	D	T	A	F	Y	A	W	D	A	R	G	H	G	K	S	S	G	P	R	G	Y	S	P
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		S	K	Y	I	I	K	Q	L	E	I	P	F	E	K	G	K	I	T	A	H	L	H	L	T	N	T	D	K	P	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K	Y	P	L	T	E	D
Template Known Secondary structure			S	S										T	T										S		S	S	S											T	T	S		G	G	G							T	T	G	G	G	G	T									T	T	S	G	G	G	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	L	A	R	P	A	L	A	L	W	H	R	L	R
Query Conservation
Alig confidence			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		Y	.	.	.	.	S	R	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	D	H	H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L	G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	.	.	.	.	T										G	G	G		T	T												T													T	G	G	G								S				S										T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		244					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	D	A	A	A	I	T	L	P	T	Q	L	L	I	S	G	D	D	Y	V	V	H	R	Q	P	Q	I	D	F	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N	Q	M	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	S												T	T		S											G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	R	S	P	L	K	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	R	A	L	A	F	E	K	M	Q	S	F	I	S	R	L	Y
Query Conservation
Alig confidence								.	.												.	.	.	.
Template Conservation								.	.												.	.	.	.
Template Sequence		F	F	S	T	Y	G	.	.	K	A	K	K	I	S	S	K	T	I	T	.	.	.	.	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L	E	D	E	L
Template Known Secondary structure			T	B	T	T		.	.							S	S		S	T	.	.	.	.	T	S
Template Predicted Secondary structure								.	.												.	.	.	.
Template SS confidence
		379	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions