Job Description P76092 Confidence 99.73% Date Thu Jan 5 12:18:46 GMT 2012 Rank 289 Aligned Residues 163 % Identity 12% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.				.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	.	.	.	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E
Query Conservation																																																															.	.	.
Alig confidence												.																										.																									.	.	.
Template Conservation												.																										.
Template Sequence		D	A	E	F	E	Q	L	R	S	Q	.	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	.	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E	R	L	P
Template Known Secondary structure										T	T	.	S	S							S		T	T												T	T	.								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T	T
Template Predicted Secondary structure												.																										.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E
Query Conservation
Alig confidence		.																						.																															.	.	.	.	.	.
Template Conservation		.																						.																															.	.	.	.	.	.
Template Sequence		.	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	.	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H	A	W	.	.	.	.	.	.	R	P	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S	A	D	E	W
Template Known Secondary structure		.	S											S										.		T	S	S	S									T													G	G	G	B	.	.	.	.	.	.	T	T	B		G	G	G	T	T
Template Predicted Secondary structure		.																						.																															.	.	.	.	.	.
Template SS confidence
			92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	R	Y	A	E	A	G	W	K	L	A	D	C	R
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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