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Job DescriptionP76092
Confidence99.29%DateThu Jan 5 12:18:46 GMT 2012
Rank456Aligned Residues134
% Identity19%Templatec3lduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420...... ...430..
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Query Sequence  LQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ANEPAV
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Template Sequence  IRETLAAGLIYLTPWKAGRVLVDPXCGSGTILIEAAXIGINXAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK.
Template Known Secondary structure 

TS


TTS
TT
TT
TT

TTTTS

GGGG
TTS
S

S

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   176...180.........190.........200.........210.........220.........230.........240.........250....
 
   433......440.........450.........460.........470.........480.........490.. .......500.........510.
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Query Sequence  SDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYEL. FPENEQVKNSLAGLANAIE
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Template Sequence  FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK. . . . SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR
Template Known Secondary structure 

S
T
GGG

GGG

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S
BS






S
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   255....260.........270.........280.........290.... .....300.........310.........320.........330
 
   512.......520.........
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Query Sequence  . . PGGILIYTGQPWHPQLEM
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Template Sequence  KLKNWSYYLITSYEDFEYEF
Template Known Secondary structure  TSBS
S
TT
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   331........340.........350
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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