Job Description P76092 Confidence 99.92% Date Thu Jan 5 12:18:46 GMT 2012 Rank 105 Aligned Residues 242 % Identity 12% Template c3l80A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1393c; PDBTitle: crystal structure of smu.1393c from streptococcus mutans ua159 Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	P	G	A	K	K	V	I	V	L	F	H	R	G	H	.	.	E	H	S	G	R	L	Q	H	L	V	D	E	L	A	M	P	D	T	A	F	Y	A	W	D	A	R	G	H	G	K	S	S	G	P	R	G	Y	S	P	S	L	A	R
Query Conservation																																					.	.
Alig confidence																		.	.	.	.	.															.	.														.
Template Conservation																		.	.	.	.	.																														.
Template Sequence		N	K	E	X	V	N	T	L	L	G	P	I	Y	T	C	H	.	.	.	.	.	R	E	G	N	P	C	F	V	F	L	S	G	A	G	F	F	S	T	A	D	N	F	A	N	I	I	D	K	L	.	P	D	S	I	G	I	L	T	I	D	A	P	N	S	G	Y	S	P	V	S	N	Q	A	N	V	G	L	R	D
Template Known Secondary structure									T	T	S							.	.	.	.	.				S	S								S	S	S							T					T	T	S	.		T	T	S								T	T	S	T	T	S						T	T
Template Predicted Secondary structure																		.	.	.	.	.																														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	L	A	R	P	A	L	A	L	W	H	R	L	R	G	L	F	F
Query Conservation
Alig confidence														.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	V	N	A	I	L	X	I	F	E	H	F	.	.	.	.	.	.	K	F	Q	S	Y	L	L	C	V	H	S	I	G	G	F	A	A	L	Q	I	X	N	Q	S	S	K	A	C	L	G	F	I	G	L	E	P	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	X	I	Y	R	A	G	F	S	S	D
Template Known Secondary structure													S	.	.	.	.	.	.			S								T	T													S	S									S				.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S
Template Predicted Secondary structure														.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.	130	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																								.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	A	I	T	L	P	T	Q
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	P	Q	L	A	L	R	R	Q	K	L	K	T	A	A	D	R	L	N	Y	L	K	D	L	S	R	S	H	F	S	S	Q	Q	F	K	Q	L	W	R	G	Y	D	Y	C	Q	R	Q	L	N	D	V	Q	S	L	P	D	F	K	I	R	L	A	L	G	E	E	D	F	K	T	G	I	S	E	K	I	P	S	I
Template Known Secondary structure		S	S									T			S																S																					T	T	T	T	S	T	T			S	S					G	G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	S	G	D	D	Y	V	V	H	R	Q	P	Q	I	D	F	Y	Q	R	L	R	S	P	L	K	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	R	A	L	A	F	E	K	M	Q	S	F	I	S	R
Query Conservation
Alig confidence											.	.															.	.						.											.
Template Conservation											.	.															.	.						.											.
Template Sequence		V	F	S	E	S	F	R	E	K	.	.	E	Y	L	E	S	E	Y	L	N	K	H	T	Q	T	.	.	K	L	I	L	C	.	G	Q	H	H	Y	L	H	W	S	E	.	T	N	S	I	L	E	K	V	E	Q	L	L	S	N
Template Known Secondary structure						G	G	G			.	.				T	S	T	T					T	T		.	.						.		S	S	S							.														T
Template Predicted Secondary structure											.	.															.	.						.											.
Template SS confidence
		220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.		.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions