Job Description P76092 Confidence 99.87% Date Thu Jan 5 12:18:46 GMT 2012 Rank 149 Aligned Residues 238 % Identity 13% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																		.	.																									.	.	.
Query SS confidence																										.	.	.																		.	.																									.	.	.
Query Sequence		I	P	G	E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	.	.	.	P	G	A	K	K	V	I	V	L	F	H	R	G	H	E	H	S	.	.	G	R	L	Q	H	L	V	D	E	L	A	M	P	D	T	A	F	Y	A	W	D	A	R	G	.	.	.	H	G	K	S	S	G	P
Query Conservation																										.	.	.																		.	.																									.	.	.
Alig confidence																										.	.	.																		.	.																									.	.	.
Template Conservation
Template Sequence		V	S	E	Q	R	F	Y	Q	S	K	D	G	T	R	V	P	L	I	I	S	Y	R	K	G	L	K	L	D	G	S	N	P	T	I	L	Y	G	Y	G	G	F	D	V	S	L	T	P	S	F	S	V	S	V	A	N	W	L	D	L	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	Q	A	W	H	L
Template Known Secondary structure											T	T	S											T	T				S	S											B	T	T	B																T	T									T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	S	P	S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	L	A	R	P	A	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	T	Q	Q	N	K	Q	N	V	F	D	D	F	I	A	A	A	E	Y	L	K	A	E	G	Y	T	R	T	D	R	L	A	I	R	G	G	S	N	G	G	L	L	V	G	A	V	X	T	Q	R	P	D	L	X	R	V	A	L	P	A	V	G	V	L	D	X	L	R	Y	H	T	F	T	A	G	T	G	W	A
Template Known Secondary structure		T	T	S	G	G	G																		T	T	S			G	G	G							T														T	T	T		S						S					G	G	G	S	T	T	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		W	H	R	L	R	G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	D	A	A	A	I	T	L	.	.	P	T	Q	L	L	I	S	G	D	D	Y	V	V	H	R
Query Conservation																																																																	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	Y	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	E	A	X	F	D	Y	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	S	P	L	H	N	V	R	P	G	V	S	Y	P	S	T	X	V	T	T	A	D	H	D	D	R	V	V	P
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T			T	T												S	S		S	S	S		T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		581	.	.	.	.	.														.	.	.	590	.	.	.	.	.	.	.																					.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		Q	P	Q	I	D	F	Y	Q	R	L	R	S	P	L	K	.	.	.	.	.	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	R	A	L	A	F	E	K	M	Q	S	F	I	S	R	L	Y
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		A	H	S	F	K	F	A	A	T	L	Q	A	D	N	A	G	P	H	P	Q	L	I	R	I	E	T	P	V	A	K	.	.	.	.	.	.	.	L	I	E	Q	S	A	D	I	Y	A	F	T	L	Y	E	X
Template Known Secondary structure													T	T			S	S	S													.	.	.	.	.	.	.																T
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.								.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions