Return to main results Retrieve Phyre Job Id

Job DescriptionP76092
Confidence99.76%DateThu Jan 5 12:18:46 GMT 2012
Rank267Aligned Residues159
% Identity16%Templatec3g07C_
PDB info PDB header:transferaseChain: C: PDB Molecule:7sk snrna methylphosphate capping enzyme; PDBTitle: methyltransferase domain of human bicoid-interacting protein2 3 homolog (drosophila)
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   407..410.........420.........430.........440.........450.........460 .........470........
Predicted Secondary structure 



















........












Query SS confidence 





















































. . . . . . . .

















Query Sequence  LAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGR. . . . . . . . VRFEQGDAFNPEELSALT
Query Conservation      






 
     
    
    
   
 

  
  
            ........
     
      
    
Alig confidence 
























.



























........

















Template Conservation     









     

     .    


 
   
  
                                      
Template Sequence  RGRDVLDLGCNVGHLTLSIACKWGP. SRXVGLDIDSRLIHSARQNIVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQT
Template Known Secondary structure  TTSS
TT
T

.SS
T


SSTT

SSTTTT




SSTT

Template Predicted Secondary structure 









.


























Template SS confidence 















































































   443......450.........460....... ..470.........480.........490.........500.........510.........520.
 
   479480.........490.... .....500.........510.........520.........530.........540.........550.....
Predicted Secondary structure 








...

















Query SS confidence 















. . .




























































Query Sequence  PRPTLAIVSGLYELFP. . . ENEQVKNSLAGLANAIEPGGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDS
Query Conservation     
 
          ...
       
      
 


 

                               
  

  
Alig confidence 















...



























































.
Template Conservation    

 
                     
      




 

                         
          
.
Template Sequence  PEYDVVLCLSLTKWVHLNWGDEGLKRXFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYL.
Template Known Secondary structure 

S



TTTTS




GGG.
Template Predicted Secondary structure 




















.
Template SS confidence 















































































   573......580.........590.........600.........610.........620.........630.........640.........650.
 
   556...560.......
Predicted Secondary structure 



Query SS confidence 











Query Sequence  LVRDAGFDKCTQ
Query Conservation 
   


  
  
Alig confidence 











Template Conservation     
 

   
 
Template Sequence  TSPDVGFSSYEL
Template Known Secondary structure  TSTTT


Template Predicted Secondary structure 






Template SS confidence 











   652.......660...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions