Job Description P76092 Confidence 99.07% Date Thu Jan 5 12:18:46 GMT 2012 Rank 488 Aligned Residues 112 % Identity 11% Template c3fydA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable dimethyladenosine transferase; PDBTitle: crystal structure of dim1 from the thermophilic archeon,2 methanocaldococcus jannaschi Resolution 1.75 Å

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		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E
Query Conservation
Alig confidence																																						.	.	.																										.	.	.												.	.
Template Conservation																																						.	.	.																										.	.	.												.	.
Template Sequence		K	N	F	V	N	K	A	V	E	S	A	N	L	T	K	D	D	V	V	L	E	I	G	L	G	K	G	I	L	T	E	E	L	A	K	N	.	.	.	A	K	K	V	Y	V	I	E	I	D	K	S	L	E	P	Y	A	N	K	L	K	E	L	Y	N	.	.	.	N	I	E	I	I	W	G	D	A	L	K	.	.
Template Known Secondary structure												T	T			T	T									T	T	S										.	.	.	S	S							S		G	G	G												S	.	.	.	S						S		T	T	T	.	.
Template Predicted Secondary structure																																						.	.	.																										.	.	.												.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T
Query Conservation
Alig confidence		.																							.	.	.	.	.	.
Template Conservation		.																							.	.	.	.	.	.
Template Sequence		.	V	D	L	N	K	L	D	F	N	K	V	V	A	N	L	P	Y	Q	I	S	S	P	.	.	.	.	.	.	I	T	F	K	L	I	K	R	G	F	D	L	A	V	L	M	Y	Q
Template Known Secondary structure		.	S		G	G	G				S								G	G	G				.	.	.	.	.	.											S
Template Predicted Secondary structure		.																							.	.	.	.	.	.
Template SS confidence
			88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions