Job Description P76092 Confidence 99.74% Date Thu Jan 5 12:18:46 GMT 2012 Rank 279 Aligned Residues 234 % Identity 16% Template c3ed1E_ PDB info PDB header:hydrolase receptor Chain: E: PDB Molecule:gibberellin receptor gid1; PDBTitle: crystal structure of rice gid1 complexed with ga3 Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																					.	.	.	.	.																		.
Query SS confidence																																					.	.	.	.	.																		.
Query Sequence		E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	P	G	A	K	K	V	I	V	L	F	H	R	G	H	.	.	.	.	.	E	H	S	G	R	L	Q	H	L	V	D	E	L	A	M	P	D	.	T	A	F	Y	A	W	D	A	R	G	H	G	K	S	S	G	P	R	G	Y	S	P
Query Conservation																																					.	.	.	.	.																		.
Alig confidence																																					.	.	.	.	.																		.														.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		D	H	I	I	D	Q	S	V	G	L	E	V	R	I	Y	R	A	D	A	P	A	A	E	P	F	P	V	I	I	F	F	H	G	G	S	F	V	H	S	S	A	S	S	T	I	Y	D	S	L	C	R	R	F	V	K	L	S	K	G	V	V	V	S	V	N	Y	R	R	A	P	E	.	.	.	.	.	.	.	.	H
Template Known Secondary structure							T	T	T	T													S	S											S	T	T	T	S			T	T	B															T	S										T	T	T	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																								.	.																										.	.	.																											.	.
Query SS confidence																								.	.																										.	.	.																											.	.
Query Sequence		S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	.	.	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	.	.	.	P	A	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	L	A	R	P	A	L	.	.
Query Conservation																								.	.																										.	.	.																											.	.
Alig confidence																								.	.																										.	.	.																											.	.
Template Conservation
Template Sequence		R	Y	P	C	A	Y	D	D	G	W	T	A	L	K	W	V	M	S	Q	P	F	M	R	S	A	Q	A	R	V	F	L	S	G	D	S	S	G	G	N	I	A	H	H	V	A	V	R	A	A	D	E	G	V	K	V	C	G	N	I	L	L	N	A	M	F	G	G	T	E	R	T	E	S	E	R	R	L	D	G	K
Template Known Secondary structure			T	T															T		T	T	T	B				B																								T	T				S												S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
											156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	L	W	H	R	L	R	G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	D	A	A	A	I	T	L	P	T	Q	L	L	I
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	V	T	L	Q	D	R	D	W	Y	W	K	A	Y	L	P	E	D	A	D	R	D	H	P	A	C	N	P	F	G	P	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	G	L	P	F	A	K	S	L	I	I	V
Template Known Secondary structure		S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																																.	280	.	.	.	.	.	.	.	.	.	290	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																						.	.																						.	.	.
Query SS confidence																						.	.																						.	.	.
Query Sequence		S	G	D	D	Y	V	V	H	R	Q	P	Q	I	D	F	Y	Q	R	L	R	.	.	S	P	L	K	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	.	.	.	R	A	L	A	F	E	K	M	Q	S	F	I	S	R	L	Y
Query Conservation																						.	.																						.	.	.
Alig confidence										.	.											.	.																						.	.	.
Template Conservation										.	.
Template Sequence		S	G	L	D	L	T	C	D	.	.	R	Q	L	A	Y	A	D	A	L	R	E	D	G	H	H	V	K	V	V	Q	C	E	N	A	T	V	G	F	Y	L	L	P	N	T	V	H	Y	H	E	V	M	E	E	I	S	D	F	L	N	A	N	L
Template Known Secondary structure			T	T	S	T	T			.	.												T	T									T	T			T	T	G	G	G	S	S		S																	T
Template Predicted Secondary structure										.	.
Template SS confidence
		293	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions