|   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | Q | R | K | T | H | L | Q | I | L | I | K | Q | A | V | A | D | L | H | A | K | G | L | A | V | R | V | V | D | I | A | A | G | H | G | R | Y | V | L | D | A | L | A | N | E | P | A | V | S | D | I | L | L | R | D | Y | S | E | L | N | V | A | Q | G | Q | E | M | I | A | Q | R | G | M | S | G | R | V | R | F |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   | . |   |
|   |   |
Template Sequence |   |
A | T | A | K | K | L | I | T | K | Q | E | V | R | A | V | T | L | S | K | L | R | L | Q | D | D | L | V | M | W | D | I | G | A | G | S | A | S | V | S | I | E | A | S | N | L | M | P | N | . |
G | R | I | F | A | L | E | R | N | P | Q | Y | L | G | F | I | R | D | N | L | K | K | F | V | A | R | . |
N | V | T | L |
Template Known Secondary structure |   |
|
|
| T | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T | . | S |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | . | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
. | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | |
. | 300 | . | . |
  |
  |   |
464 | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | G | D | A | F | N | P | E | E | L | S | A | L | T | P | R | P | T | L | A | I | V | S | G | L | Y | E | L | F | P | E | N | E | Q | V | K | N | S | L | A | G | L | A | N | A | I | E | P | G | G | I | L | I | Y | T | G | Q | P | W | H | P | Q | L | E | M | I | A | G | V | L | T | S | H | K | D | G | K | P | W |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
V | E | A | F | A | . |
. |
. |
P | E | G | L | D | D | L | P | D | P | D | R | V | F | I | G | G | S | G | G | M | L | . |
. |
. |
. |
. |
. |
E | E | I | I | D | A | V | D | R | R | L | K | S | E | G | V | I | V | L | N | A | V | T | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |
|
| T | . | . | . | T | T | T |
| T | T | S |
|
|
| S |  |  |  |  | S |
|
| T | T |
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |
| S |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
303 | . | . | . | . | |
|
|
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
544 | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | R | V | R | S | Q | G | E | M | D | S | L | V | R | D | A | G | F | D | K | C | T | Q | R | I |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
T | L | T | K | A | V | E | F | L | E | D | H | G | Y | M | V | E | V | A | C | V |
Template Known Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
  |