Job Description P76092 Confidence 99.89% Date Thu Jan 5 12:18:46 GMT 2012 Rank 139 Aligned Residues 178 % Identity 9% Template c3bkxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.							.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	.	.	.	.	.	.	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S	G	R	V
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	R	R	Q	T	A	H	R	L	A	I	A	E	A	W	Q	V	K	P	G	E	K	I	L	E	I	G	C	G	Q	G	D	L	S	A	V	L	A	D	Q	V	G	S	S	G	H	V	T	G	I	D	I	A	S	P	D	Y	G	A	P	L	T	L	G	Q	A	W	N	H	L	L	A	G	P	L	G	D	R	L
Template Known Secondary structure																		T			T	T							S		T	T	S												T	T								S	S		T	T			S	S	S												S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.											.	.	.	530	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	.	.	.	.	.	.	.	.	.	.	L	E	M	I	A
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.
Template Sequence		T	V	H	F	N	T	N	L	S	D	D	L	G	P	I	A	D	Q	H	F	D	R	V	V	L	A	H	S	L	W	Y	F	A	S	.	.	.	A	N	A	L	A	L	L	F	K	N	X	A	A	V	C	D	H	V	D	V	A	E	W	S	X	Q	P	T	A	L	D	Q	I	G	H	L	Q	A	A	X	I	Q	G
Template Known Secondary structure					S	S			T	T	T			G	G	G	T	T				S						S		G	G	G	S	S		.	.	.												T	T	T		S									S	S		S	S	G	G	G
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L	V	R	D	A	G	F	D	K	C	T	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Y	A	I	A	P	S	D	V	A	N	I	R	T	L	I	T	P	D	T	L	A	Q	I	A	H	D	N	T	W	T	Y	T	A	G	T
Template Known Secondary structure							S			S	S					S														T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions