Job Description P76092 Confidence 99.23% Date Thu Jan 5 12:18:46 GMT 2012 Rank 466 Aligned Residues 165 % Identity 14% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	W	R	G	I	R	Q	R	K	T	H	L	Q	I	L	I	K	Q	A	V	A	D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	Q	R	G	M	S
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		P	R	M	R	V	N	R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	.	.	.	.	.	.	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	K	A	Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P
Template Known Secondary structure		G	G	G																				.	.	.	.	.	.	S							S	S		T	T	T											S										S															T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		459		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A	L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H
Query Conservation			.
Alig confidence			.														.																.			.	.			.	.	.	.
Template Conservation																	.																.			.	.			.	.	.	.
Template Sequence		E	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	.	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	P	.	F	G	.	.	T	P	.	.	.	.	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S	L	T	A	T	D	T	A	P	L	S	G	T	Y	P	K	T	C	M	R	R
Template Known Secondary structure		G	G	G						S							.	T	S			S	S										.	S	S	.	.			.	.	.	.																												T	T	S	S
Template Predicted Secondary structure																	.																.			.	.			.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.			.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	A	R	P	L	R	N	E	F	K	H	E	V	G	I	R	I	L	I
Template Known Secondary structure				S	B				S	T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions