Job Description P76092 Confidence 99.18% Date Thu Jan 5 12:18:46 GMT 2012 Rank 473 Aligned Residues 145 % Identity 19% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.					.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		D	L	H	A	K	G	L	A	V	R	V	V	D	I	A	A	G	H	G	R	Y	V	L	D	A	L	A	N	E	P	A	V	S	D	I	L	L	R	D	Y	S	E	L	N	V	A	Q	G	Q	E	M	I	A	.	.	.	.	Q	R	G	M	S	G	R	V	R	F	E	Q	G	D	A	F	N	P	E	E	L	S	A
Query Conservation																																																							.	.	.	.
Alig confidence																																.																							.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																.																																										.	.	.	.	.	.	.	.
Template Sequence		P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	.	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	V	N	Q	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S									S			S	S							T	T		T	T	.									S												S					T	T		T	T		T	T									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																																										.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	R	P	T	L	A	I	V	S	G	L	Y	E	L	F	P	E	N	E	Q	V	K	N	S	L	A	G	L	A	N	A	I	E	P	G	G	I	L	I	Y	T	G	Q	P	W	H	P	Q	L	E	M	I	A	G	V	L	T	S	H	K	D	G	K	P	W	V	M	R	V	R	S	Q	G	E	M	D	S	L
Query Conservation
Alig confidence												.	.	.	.	.						.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.						.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	Q	T	F	D	V	I	I	S	.	.	.	.	.	D	C	T	S	A	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K
Template Known Secondary structure		T	T									.	.	.	.	.				T	T	.	.	.	.	.								T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure												.	.	.	.	.						.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.						.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.						.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		V	R	D	A	G	F	D	K	C	T	Q	R	I	D	E	W	.	.	.	.	.	G	I	F	T	V	S	M	A	V	R	R	D	N
Query Conservation																		.	.	.	.	.
Alig confidence						.												.	.	.	.	.
Template Conservation						.
Template Sequence		L	S	H	Y	.	F	S	D	V	G	F	Y	Q	A	A	I	P	T	Y	Y	G	G	I	M	T	F	A	W	A	T	D	N	D	A
Template Known Secondary structure				T	T	.		S										T	T	S	S	S	S									S		T	T
Template Predicted Secondary structure						.
Template SS confidence
		209	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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