Job Description P76092 Confidence 99.72% Date Thu Jan 5 12:18:46 GMT 2012 Rank 297 Aligned Residues 215 % Identity 12% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.													.
Query SS confidence																									.	.	.	.	.													.
Query Sequence		W	P	A	L	Q	P	G	A	K	K	V	I	V	L	F	H	R	G	H	E	H	S	G	.	.	.	.	.	R	L	Q	H	L	V	D	E	L	A	M	P	.	D	T	A	F	Y	A	W	D	A	R	G	H	G	K	S	S	G	P	R	G	Y	S	P	S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A
Query Conservation																									.	.	.	.	.													.
Alig confidence																									.	.	.	.	.													.															.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V	S	V	N	Y	R	R	A	P	E	.	.	.	.	.	.	.	.	N	P	Y	P	C	A	Y	D	D	G	W	I	A	L	N	W	V
Template Known Secondary structure		T					S	S	S										S	T	T	T	S			T	T	B															T	S										T	T	T	.	.	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		99	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.												150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																															.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.																															.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	D	.	.	.	.	.	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	.	.	.	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	.	.	.	.	.	.	.	.	.	.	.	L	A	R	P	A	L	A	L	W	H
Query Conservation					.	.	.	.	.																															.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																															.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V	L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K
Template Known Secondary structure			T		G	G	G			T	T	T	S	S									T															T	T	T										S						S	S									T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	D	A	A	A	I	T	L	P	T	Q	L	L	I	S	G	D	D	Y	V	V	H	R	Q	P	Q	I
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S	P	R	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L	I	R	D	.	.	W	Q	L
Template Known Secondary structure				S		T	T			T	T	S	T	T	T		T	T	S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T												T	T	S	T	T			.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																																.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.
		240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure									.	.															.	.	.
Query SS confidence									.	.															.	.	.
Query Sequence		D	F	Y	Q	R	L	R	.	.	S	P	L	K	E	L	H	L	L	P	G	F	Y	H	.	.	.	D	T	L	G	E	E	N	R	A	L	A	F	E	K	M	Q	S	F	I	S
Query Conservation									.	.															.	.	.
Alig confidence									.	.															.	.	.
Template Conservation
Template Sequence		A	Y	A	E	G	L	K	K	A	G	Q	E	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V	N
Template Known Secondary structure										T	T									T	T			T	T	T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions