Job Description P76092 Confidence 99.86% Date Thu Jan 5 12:18:46 GMT 2012 Rank 160 Aligned Residues 245 % Identity 13% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.
Predicted Secondary structure																											.	.	.																			.	.																													.	.	.
Query SS confidence																											.	.	.																			.	.																													.	.	.
Query Sequence		I	P	G	E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	P	.	.	.	G	A	K	K	V	I	V	L	F	H	R	G	H	E	H	S	G	R	.	.	L	Q	H	L	V	D	E	L	A	M	P	D	T	A	F	Y	A	W	D	A	R	G	H	G	K	S	S	G	.	.	.	P
Query Conservation																											.	.	.																			.	.																													.	.	.
Alig confidence																											.	.	.																			.	.																													.	.	.
Template Conservation
Template Sequence		K	V	E	R	R	F	A	T	A	P	D	Q	T	K	I	P	L	S	V	V	Y	H	K	D	L	D	M	S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	L	P	Y	C	D	R	G	M	I	F	A	I	A	H	I	R	G	G	S	E	L	G	R	A	W	Y	E
Template Known Secondary structure											T	T												T	T	S		T	T	S												T	T									G	G	G					T	T	T									T	T	S		T	T		T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		78	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	G	Y	S	.	P	S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	I	R	G	L	V	L	A	S	P	A	F	K	V	K	L	Y	V	P	L	A	R	P	A	L	A
Query Conservation						.
Alig confidence						.																																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	A	K	Y	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L	T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D	L	F	K	V	A	L	A	G	V	P	F	V	D	V	M	.	.	.	.	.	.	.	.	.	.	T
Template Known Secondary structure		T	T	S	S	G	G	G	T																	T	T	S			G	G	G							T														G	G	G		S						S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.											.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	W	H	R	L	R	G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	S	E	R	I	I	R	D	A	A	A	I	T	L	P	.	T	Q	L	L	I	S	G	D	D	Y	V	V	H	R
Query Conservation																																																																			.
Alig confidence																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	C	D	P	S	I	P	L	T	T	G	E	W	E	E	W	G	N	P	.	N	E	Y	K	Y	Y	D	Y	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	P	M	D	N	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y
Template Known Secondary structure				T		T	T	S	T	T					T	T	T	T			T	.	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	G	G	G			S	S											T	T		S	S	S		T
Template Predicted Secondary structure																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.																					.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.
Predicted Secondary structure																	.	.	.	.	.																									.	.	.
Query SS confidence																	.	.	.	.	.																									.	.	.
Query Sequence		Q	P	Q	I	D	F	Y	Q	R	L	R	S	P	L	K	.	.	.	.	.	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	R	A	L	A	F	E	K	.	.	.	M	Q	S	F	I	S	R	L	Y
Query Conservation																	.	.	.	.	.																									.	.	.
Alig confidence																	.	.	.	.	.												.	.												.	.	.
Template Conservation																																	.	.
Template Sequence		W	E	P	A	K	W	V	S	K	L	R	E	C	K	T	D	N	N	E	I	L	L	N	I	D	M	E	S	G	H	F	.	.	S	A	K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K	H	L
Template Known Secondary structure																	S										T	T			S	S	.	.			S	S																			T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.			.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions