Return to main results Retrieve Phyre Job Id

Job DescriptionP76092
Confidence99.44%DateThu Jan 5 12:18:46 GMT 2012
Rank428Aligned Residues118
% Identity17%Templatec2pbfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein-l-isoaspartate o-methyltransferase beta-aspartate PDBTitle: crystal structure of a putative protein-l-isoaspartate o-2 methyltransferase beta-aspartate methyltransferase (pcmt) from3 plasmodium falciparum in complex with s-adenosyl-l-homocysteine
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   390.........400.........410.........420......... 430.........440.........450........ .460.
Predicted Secondary structure 










....









....

Query SS confidence 







































. . . .




























. . . .


Query Sequence  HLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANE. . . . PAVSDILLRDYSELNVAQGQEMIAQRGMS. . . . GRV
Query Conservation   
   
   
           






 
     
    ....
    
   
 

  
  
          ....  
Alig confidence 

















..



















....




























....


Template Conservation     
  
  
   
 

 .. 




 


  
  

            
  

        
                
Template Sequence  HMHALSLKRLINVLKPGS. . RAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF
Template Known Secondary structure  TTTS
TT
..S
TTSTTTTT
TT
S

GGGGSSTT
Template Predicted Secondary structure 





..




















Template SS confidence 















































































   65....70.........80.. .......90.........100.........110.........120.........130.........140..
 
   462.......470...... ...480.........490.........500.........510........
Predicted Secondary structure 










.














Query SS confidence 














.









































Query Sequence  RFEQGDAFNPEELSA. LTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPGGILIY
Query Conservation       
      
  .     
 
          
       
      
 


 

 
Alig confidence 














.















.........
















Template Conservation       
               
 
        .........    
   




 

 
Template Sequence  KIIHKNIYQVNEEEKKELGLFDAIHVGASASE. . . . . . . . . LPEILVDLLAENGKLII
Template Known Secondary structure 

GGG




SBBSS.........

Template Predicted Secondary structure 


















.........



Template SS confidence 

























































   143......150.........160.........170.... .....180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions